Caldilinea aerophila DSM 14535 = NBRC 104270

anaerobic

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Caldilineae

Order

Caldilineales

Family

Caldilineaceae

Genus

Caldilinea

Description

Caldilinea aerophila DSM 14535 (also known as NBRC 104270) is an anaerobic bacterium characterized by its single replicon structure, with its genomic information accessible under the accession NC_017079.1. This organism thrives in environments devoid of oxygen, which is crucial for its metabolic processes. The classification of Caldilinea aerophila as an anaerobe indicates its adaptation to specific ecological niches where oxygen is limited or absent. Such adaptations are often observed in microbial communities found in sediments, deep-sea vents, or other anoxic environments. The presence of a single replicon suggests a streamlined genetic architecture, which may be advantageous for its survival and reproduction in these challenging habitats. The ecological significance of Caldilinea aerophila lies in its potential role in biogeochemical cycles, particularly in anaerobic degradation processes. As an anaerobic organism, it may participate in the degradation of organic matter, contributing to nutrient cycling in its environment. Furthermore, studying such organisms can provide insights into the diversity of life forms that adapt to extreme conditions, highlighting the resilience and versatility of microbial life. Understanding the functional traits of Caldilinea aerophila can also enhance our knowledge of microbial ecology and the various roles these organisms play in maintaining ecosystem balance.

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassCaldilineae
OrderCaldilineales
FamilyCaldilineaceae
GenusCaldilinea
SpeciesCaldilinea aerophila
StrainDSM 14535 = NBRC 104270

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caldilinea aerophila DSM 14535 = NBRC 104270


Gene Summary

Adenine Count

1069202 bp

Thymine Count

1052176 bp

Guanine Count

1507993 bp

Cytosine Count

1515502 bp

Genome Length

5144873 bp

Protein-coding Genes

4096 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphate abc transporter permease subunit pstcCLDAP_RS00415Not AvailableNegative119122 - 12006333837.1
psts family phosphate abc transporter substrate-binding proteinCLDAP_RS00420Not AvailableNegative120312 - 12137337808.6
atp-binding proteinCLDAP_RS00425Not AvailableNegative121527 - 12293052024.4
response regulator transcription factorCLDAP_RS00430Not AvailableNegative123277 - 12399627579.6
glycosyltransferase family 2 proteinCLDAP_RS00435Not AvailablePositive124253 - 12495126478.6
glycosyltransferase family 4 proteinCLDAP_RS00440Not AvailablePositive124955 - 12615744548.2
rpn family recombination-promoting nuclease/putative transposaseCLDAP_RS00445Not AvailablePositive126434 - 12675712704.1
hypothetical proteinCLDAP_RS00450Not AvailablePositive126754 - 12705611123.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbCLDAP_RS00455Not AvailableNegative127187 - 12868055488.6
tetratricopeptide repeat proteinCLDAP_RS00460Not AvailablePositive128785 - 13140695188.3

Displaying genes 81 – 90 of 4154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.