Caldilinea aerophila DSM 14535 = NBRC 104270

anaerobic

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Caldilineae

Order

Caldilineales

Family

Caldilineaceae

Genus

Caldilinea

Description

Caldilinea aerophila DSM 14535 (also known as NBRC 104270) is an anaerobic bacterium characterized by its single replicon structure, with its genomic information accessible under the accession NC_017079.1. This organism thrives in environments devoid of oxygen, which is crucial for its metabolic processes. The classification of Caldilinea aerophila as an anaerobe indicates its adaptation to specific ecological niches where oxygen is limited or absent. Such adaptations are often observed in microbial communities found in sediments, deep-sea vents, or other anoxic environments. The presence of a single replicon suggests a streamlined genetic architecture, which may be advantageous for its survival and reproduction in these challenging habitats. The ecological significance of Caldilinea aerophila lies in its potential role in biogeochemical cycles, particularly in anaerobic degradation processes. As an anaerobic organism, it may participate in the degradation of organic matter, contributing to nutrient cycling in its environment. Furthermore, studying such organisms can provide insights into the diversity of life forms that adapt to extreme conditions, highlighting the resilience and versatility of microbial life. Understanding the functional traits of Caldilinea aerophila can also enhance our knowledge of microbial ecology and the various roles these organisms play in maintaining ecosystem balance.

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassCaldilineae
OrderCaldilineales
FamilyCaldilineaceae
GenusCaldilinea
SpeciesCaldilinea aerophila
StrainDSM 14535 = NBRC 104270

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caldilinea aerophila DSM 14535 = NBRC 104270, complete sequence.

Gene Summary

Adenine Count

1069202 bp

Thymine Count

1052176 bp

Guanine Count

1507993 bp

Cytosine Count

1515502 bp

Genome Length

5144873 bp

Protein-coding Genes

4096 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ykgj family cysteine cluster proteinCLDAP_RS12555Not AvailableNegative3116593 - 311687410037.2
helix-turn-helix domain-containing proteinCLDAP_RS12560Not AvailableNegative3116874 - 311876368540.1
cytochrome c nitrite reductase small subunitCLDAP_RS12565Not AvailablePositive3119064 - 311954917937.0
ammonia-forming cytochrome c nitrite reductase subunit c552CLDAP_RS12570Not AvailablePositive3119624 - 312096450316.6
hypothetical proteinCLDAP_RS22935Not AvailablePositive3121107 - 31212806467.93
is630 family transposaseCLDAP_RS12575Not AvailableNegative3121291 - 312226237138.2
helix-turn-helix domain-containing proteinCLDAP_RS23940Not AvailableNegative3122153 - 312243110662.9
amp-binding proteinCLDAP_RS12580Not AvailableNegative3122574 - 312453872465.2
acetylxylan esteraseCLDAP_RS12585Not AvailableNegative3124724 - 312569536407.2
hypothetical proteinCLDAP_RS12590Not AvailableNegative3125727 - 312638324994.9

Displaying genes 2521 – 2530 of 4154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.