Caldilinea aerophila DSM 14535 = NBRC 104270

anaerobic

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Caldilineae

Order

Caldilineales

Family

Caldilineaceae

Genus

Caldilinea

Description

Caldilinea aerophila DSM 14535 (also known as NBRC 104270) is an anaerobic bacterium characterized by its single replicon structure, with its genomic information accessible under the accession NC_017079.1. This organism thrives in environments devoid of oxygen, which is crucial for its metabolic processes. The classification of Caldilinea aerophila as an anaerobe indicates its adaptation to specific ecological niches where oxygen is limited or absent. Such adaptations are often observed in microbial communities found in sediments, deep-sea vents, or other anoxic environments. The presence of a single replicon suggests a streamlined genetic architecture, which may be advantageous for its survival and reproduction in these challenging habitats. The ecological significance of Caldilinea aerophila lies in its potential role in biogeochemical cycles, particularly in anaerobic degradation processes. As an anaerobic organism, it may participate in the degradation of organic matter, contributing to nutrient cycling in its environment. Furthermore, studying such organisms can provide insights into the diversity of life forms that adapt to extreme conditions, highlighting the resilience and versatility of microbial life. Understanding the functional traits of Caldilinea aerophila can also enhance our knowledge of microbial ecology and the various roles these organisms play in maintaining ecosystem balance.

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassCaldilineae
OrderCaldilineales
FamilyCaldilineaceae
GenusCaldilinea
SpeciesCaldilinea aerophila
StrainDSM 14535 = NBRC 104270

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caldilinea aerophila DSM 14535 = NBRC 104270, complete sequence.

Gene Summary

Adenine Count

1069202 bp

Thymine Count

1052176 bp

Guanine Count

1507993 bp

Cytosine Count

1515502 bp

Genome Length

5144873 bp

Protein-coding Genes

4096 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinCLDAP_RS08060Not AvailableNegative1964602 - 196515620593.4
yccf domain-containing proteinCLDAP_RS08065Not AvailablePositive1965535 - 196594515298.6
Trna-argNot AvailableNot AvailablePositive1966030 - 1966101Not Available
helix-turn-helix transcriptional regulatorCLDAP_RS08075Not AvailablePositive1966569 - 196758239286.9
type i-b crispr-associated protein cas8b1/cst1CLDAP_RS08080Not AvailablePositive1967589 - 196906756684.5
type i-b crispr-associated protein cas7/cst2/devrCLDAP_RS08085Not AvailablePositive1969132 - 197020540145.5
type i-b crispr-associated protein cas5bCLDAP_RS08090Not AvailablePositive1970224 - 197095528075.8
crispr-associated helicase/endonuclease cas3CLDAP_RS08095Not AvailablePositive1970955 - 197332790615.6
crispr system precrrna processing endoribonuclease ramp protein cas6CLDAP_RS08100Not AvailablePositive1973380 - 197438136965.7
crispr-associated endonuclease cas1CLDAP_RS08105Not AvailablePositive1974435 - 197546037915.8

Displaying genes 1611 – 1620 of 4154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.