Caldilinea aerophila DSM 14535 = NBRC 104270

anaerobic

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Caldilineae

Order

Caldilineales

Family

Caldilineaceae

Genus

Caldilinea

Description

Caldilinea aerophila DSM 14535 (also known as NBRC 104270) is an anaerobic bacterium characterized by its single replicon structure, with its genomic information accessible under the accession NC_017079.1. This organism thrives in environments devoid of oxygen, which is crucial for its metabolic processes. The classification of Caldilinea aerophila as an anaerobe indicates its adaptation to specific ecological niches where oxygen is limited or absent. Such adaptations are often observed in microbial communities found in sediments, deep-sea vents, or other anoxic environments. The presence of a single replicon suggests a streamlined genetic architecture, which may be advantageous for its survival and reproduction in these challenging habitats. The ecological significance of Caldilinea aerophila lies in its potential role in biogeochemical cycles, particularly in anaerobic degradation processes. As an anaerobic organism, it may participate in the degradation of organic matter, contributing to nutrient cycling in its environment. Furthermore, studying such organisms can provide insights into the diversity of life forms that adapt to extreme conditions, highlighting the resilience and versatility of microbial life. Understanding the functional traits of Caldilinea aerophila can also enhance our knowledge of microbial ecology and the various roles these organisms play in maintaining ecosystem balance.

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassCaldilineae
OrderCaldilineales
FamilyCaldilineaceae
GenusCaldilinea
SpeciesCaldilinea aerophila
StrainDSM 14535 = NBRC 104270

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caldilinea aerophila DSM 14535 = NBRC 104270, complete sequence.

Gene Summary

Adenine Count

1069202 bp

Thymine Count

1052176 bp

Guanine Count

1507993 bp

Cytosine Count

1515502 bp

Genome Length

5144873 bp

Protein-coding Genes

4096 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
electron transfer flavoprotein subunit beta/fixa family proteinCLDAP_RS07865Not AvailablePositive1927189 - 192796526906.6
electron transfer flavoprotein subunit alpha/fixb family proteinCLDAP_RS07870Not AvailablePositive1927977 - 192895733698.6
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtCLDAP_RS07875Not AvailableNegative1929036 - 192968023405.5
llm class flavin-dependent oxidoreductaseCLDAP_RS07880Not AvailableNegative1929710 - 193072037711.6
glycerophosphoryl diester phosphodiesterase membrane domain-containing proteinCLDAP_RS07885Not AvailablePositive1931300 - 193231636659.2
duf4129 domain-containing proteinCLDAP_RS21060Not AvailablePositive1932313 - 193334138087.9
duf4350 domain-containing proteinCLDAP_RS07895Not AvailablePositive1933338 - 193458246370.3
aaa family atpaseCLDAP_RS07900Not AvailablePositive1934603 - 193555334786.2
2-hydroxyacid dehydrogenaseCLDAP_RS07905Not AvailablePositive1935630 - 193663136579.4
udp-glucuronic acid decarboxylase family proteinCLDAP_RS07910Not AvailableNegative1936682 - 193761734793.0

Displaying genes 1571 – 1580 of 4154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.