Caldilinea aerophila DSM 14535 = NBRC 104270

anaerobic

Kingdom

Bacillati

Phylum

Chloroflexota

Class

Caldilineae

Order

Caldilineales

Family

Caldilineaceae

Genus

Caldilinea

Description

Caldilinea aerophila DSM 14535 (also known as NBRC 104270) is an anaerobic bacterium characterized by its single replicon structure, with its genomic information accessible under the accession NC_017079.1. This organism thrives in environments devoid of oxygen, which is crucial for its metabolic processes. The classification of Caldilinea aerophila as an anaerobe indicates its adaptation to specific ecological niches where oxygen is limited or absent. Such adaptations are often observed in microbial communities found in sediments, deep-sea vents, or other anoxic environments. The presence of a single replicon suggests a streamlined genetic architecture, which may be advantageous for its survival and reproduction in these challenging habitats. The ecological significance of Caldilinea aerophila lies in its potential role in biogeochemical cycles, particularly in anaerobic degradation processes. As an anaerobic organism, it may participate in the degradation of organic matter, contributing to nutrient cycling in its environment. Furthermore, studying such organisms can provide insights into the diversity of life forms that adapt to extreme conditions, highlighting the resilience and versatility of microbial life. Understanding the functional traits of Caldilinea aerophila can also enhance our knowledge of microbial ecology and the various roles these organisms play in maintaining ecosystem balance.

Taxonomy

KingdomBacillati
PhylumChloroflexota
ClassCaldilineae
OrderCaldilineales
FamilyCaldilineaceae
GenusCaldilinea
SpeciesCaldilinea aerophila
StrainDSM 14535 = NBRC 104270

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caldilinea aerophila DSM 14535 = NBRC 104270, complete sequence.

Gene Summary

Adenine Count

1069202 bp

Thymine Count

1052176 bp

Guanine Count

1507993 bp

Cytosine Count

1515502 bp

Genome Length

5144873 bp

Protein-coding Genes

4096 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad-dependent oxidoreductaseCLDAP_RS05810Not AvailableNegative1439196 - 144080060530.0
cbs domain-containing proteinCLDAP_RS20930Not AvailableNegative1441167 - 144202731572.1
fad-dependent thymidylate synthaseCLDAP_RS05820Not AvailableNegative1442131 - 14422956073.02
glycoside hydrolase family 13 proteinCLDAP_RS05825Not AvailablePositive1442579 - 144406356225.5
serine proteaseCLDAP_RS05830Not AvailablePositive1444409 - 144577050871.0
4a-hydroxytetrahydrobiopterin dehydrataseCLDAP_RS05835Not AvailablePositive1445879 - 144616910750.8
hydantoinase b/oxoprolinase family proteinCLDAP_RS05840Not AvailablePositive1446189 - 144777856941.0
branched-chain amino acid transaminaseCLDAP_RS05845Not AvailableNegative1447911 - 144882533678.3
o-succinylbenzoate synthaseCLDAP_RS05850Not AvailablePositive1449132 - 145024141403.7
nudix hydrolaseCLDAP_RS20935Not AvailablePositive1450244 - 145079520200.9

Displaying genes 1161 – 1170 of 4154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.