Riemerella anatipestifer ATCC 11845 = DSM 15868

rodMotile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Riemerella anatipestifer ATCC 11845, also designated as DSM 15868, is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is known for its motility, which is an important trait that may contribute to its ecological interactions and pathogenic potential. Riemerella anatipestifer possesses a single replicon, indicating a streamlined genomic organization that is typical for many bacteria. The bacterium is primarily associated with infections in ducks and can cause significant economic losses in poultry farming due to its role as a pathogen. Understanding its genetic and phenotypic traits is essential for developing effective management strategies for controlling infections caused by this organism. The genomic information for R. anatipestifer ATCC 11845 can be accessed through the accession number NC_017045.1, which provides a resource for researchers interested in exploring its genetic makeup and potential virulence factors. In terms of ecological insight, Riemerella anatipestifer's motility and pathogenicity suggest that it may play a significant role in the dynamics of microbial communities within aquatic environments where ducks reside. Its interactions with host organisms and other microbial species could impact the health of wildlife populations and, consequently, the broader ecosystem. Studying this bacterium further may enhance our understanding of its role in animal health and its implications in veterinary microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella anatipestifer
StrainATCC 11845 = DSM 15868

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella anatipestifer ATCC 11845 = DSM 15868, complete

Gene Summary

Adenine Count

706669 bp

Thymine Count

699878 bp

Guanine Count

380575 bp

Cytosine Count

376965 bp

Genome Length

2164087 bp

Protein-coding Genes

1946 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin-dependent thiol peroxidaseRA0C_RS05195P44411Negative1085286 - 108573516910.2
endonuclease iiiRA0C_RS05200P0AB84Positive1085768 - 108639423614.8
translation elongation factor tsRA0C_RS05205A5FJI4Negative1086490 - 108745835043.6
duf6759 domain-containing proteinRA0C_RS05210Not AvailablePositive1087591 - 108817521657.1
acetyl-coa carboxylase carboxyltransferase subunit alphaRA0C_RS05215A0LYY6Negative1088253 - 108920935874.0
glutamate--trna ligaseRA0C_RS05220A0M6K0Negative1089263 - 109077457724.1
gh3 auxin-responsive promoter family proteinRA0C_RS05225Q9LQ68Positive1090934 - 109246058430.4
atp-dependent chaperone clpbRA0C_RS05230Q89YY3Negative1092542 - 109513397467.9
aminoacyl-trna hydrolaseRA0C_RS05235A6L8V3Positive1095404 - 109596721039.5
hypothetical proteinRA0C_RS05240Not AvailableNegative1095977 - 109710143089.3

Displaying genes 1061 – 1070 of 2064 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

116 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 116 metabolites

Health Effects

No health effects information available for this bacterium.