Frateuria aurantia DSM 6220

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Frateuria

Description

Frateuria aurantia DSM 6220 is a bacterium characterized by having a single replicon, which is significant for its genetic structure and replication process. The strain is cataloged with the accession number NC_017033.1, indicating its availability in genomic databases for further research and analysis. This organism's classification within the microbial community provides insights into its ecological role. While specific traits and functional capabilities of Frateuria aurantia DSM 6220 are not detailed here, the presence of a single replicon suggests streamlined genetic regulation and potential efficiency in metabolic processes. From a biological perspective, the characteristics of this bacterium can be indicative of its adaptability within various environments, although specific ecological interactions or habitats are not provided. Understanding the genetic framework of Frateuria aurantia DSM 6220 may contribute to broader studies on microbial diversity and the functional roles of bacteria in their ecosystems. Further research could elucidate its contributions to nutrient cycling, interactions with other microorganisms, or its impact on soil or water quality, depending on its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusFrateuria
SpeciesFrateuria aurantia
StrainDSM 6220

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frateuria aurantia DSM 6220, complete sequence.

Gene Summary

Adenine Count

657227 bp

Thymine Count

661790 bp

Guanine Count

1146318 bp

Cytosine Count

1138123 bp

Genome Length

3603458 bp

Protein-coding Genes

3098 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxo-hept-4-ene-1,7-dioate hydrataseFRAAU_RS08500Not AvailableNegative1832923 - 183372629614.6
5-carboxymethyl-2-hydroxymuconate isomeraseFRAAU_RS08505Not AvailableNegative1833774 - 183418114688.6
3,4-dihydroxyphenylacetate 2,3-dioxygenaseFRAAU_RS08510Not AvailableNegative1834218 - 183514134044.8
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseFRAAU_RS08515Not AvailableNegative1835299 - 183677153433.8
fumarylacetoacetate hydrolase family proteinFRAAU_RS08520Not AvailableNegative1836822 - 183756527464.8
fumarylacetoacetate hydrolase family proteinFRAAU_RS08525Not AvailableNegative1837567 - 183822323883.7
4-hydroxyphenylacetate catabolism regulatory protein hpaaFRAAU_RS08530Not AvailablePositive1838724 - 183966235020.4
hypothetical proteinFRAAU_RS08535Not AvailableNegative1839659 - 184038726646.0
hypothetical proteinFRAAU_RS08540Not AvailablePositive1840386 - 18406349044.32
sensor domain-containing diguanylate cyclaseFRAAU_RS16485Not AvailablePositive1840971 - 184209240576.0

Displaying genes 1711 – 1720 of 3262 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
Metabolite IDMetabolite nameStructureCAS number
BASm0008825O-succinyl-L-serineC7H10NO6Chemical structure of O-succinyl-L-serineNot available
Average204.159Da
Monoisotopic204.051360626Da
BASm0039933Anaerobiospirillum succiniciproducensNot available1492-23-5Not available

Displaying 1–2 of 2 metabolites

Health Effects

No health effects information available for this bacterium.