Streptomyces hygroscopicus subsp. jinggangensis 5008

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces hygroscopicus subsp. jinggangensis 5008 is a notable actinobacterium characterized by the presence of flagella, which facilitates motility. This feature is significant as it may enhance the organism's ability to navigate through its environment, potentially contributing to its ecological success and interactions with other microorganisms. The genetic makeup of S. hygroscopicus subsp. jinggangensis 5008 is defined by three replicons, indicating a complex genome structure that may play a role in its adaptability and resilience in diverse environments. The organism is represented in genomic databases by several accessions, specifically NC_016972.1, NC_017765.1, and NC_017766.1, which provide valuable resources for researchers interested in its genetic characteristics and potential applications. Given its classification within the Streptomyces genus, S. hygroscopicus subsp. jinggangensis 5008 may be involved in the production of bioactive compounds, a hallmark trait of many Streptomyces species. This ability can have significant implications for biotechnology, particularly in the development of antibiotics and other pharmaceuticals. The presence of flagella and a complex genomic structure may suggest ecological versatility, allowing this subspecies to thrive in varied environments, which could influence its role in soil dynamics and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces hygroscopicus
Strainsubsp. jinggangensis 5008

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces hygroscopicus subsp. jinggangensis 5008
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid

Gene Summary

Adenine Count

9765 bp

Thymine Count

11529 bp

Guanine Count

27199 bp

Cytosine Count

24792 bp

Genome Length

73285 bp

Protein-coding Genes

77 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ycni family proteinSHJG_RS25830Not AvailablePositive5855833 - 585655525026.4
sco family proteinSHJG_RS25835Not AvailablePositive5856659 - 585731222938.3
copper chaperone pcu(a)cSHJG_RS25840Not AvailablePositive5857309 - 585777315721.7
copper resistance copc/copd family proteinSHJG_RS25845Not AvailablePositive5857787 - 585970966292.8
iron uptake transporter deferrochelatase/peroxidase subunitSHJG_RS25850Not AvailablePositive5859718 - 586099845001.1
prephenate dehydrataseSHJG_RS25855Not AvailablePositive5861106 - 586203833356.6
serine--trna ligaseSHJG_RS25860Not AvailablePositive5862624 - 586390146769.6
had family hydrolaseSHJG_RS25865Not AvailablePositive5863898 - 586469827644.0
hypothetical proteinSHJG_RS25870Not AvailableNegative5864984 - 58652269389.84
abc transporter permeaseSHJG_RS25875Not AvailableNegative5865305 - 586602424806.0

Displaying genes 5571 – 5580 of 9390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0020080Sedoheptulose 7-phosphateC7H15O10PChemical structure of Sedoheptulose 7-phosphate2646-35-7
Average290.1618Da
Monoisotopic290.040283212Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.