Rickettsia massiliae str. AZT80

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia massiliae str. AZT80 is a notable species within the Rickettsiaceae family, recognized for its pathogenic potential and ecological significance. A key feature of this bacterium is the presence of flagella, which may play a role in its motility and interaction with host organisms. R. massiliae str. AZT80 possesses two replicons, indicating a complex genetic organization that may contribute to its adaptability and survival in various environments. The genomic information for R. massiliae str. AZT80 is available under the accession numbers NC_016931.1 and NC_016939.1. These sequences provide insights into the organism's genetic makeup and facilitate further research into its biology and pathogenic mechanisms. In ecological contexts, Rickettsia species, including R. massiliae, are often associated with arthropod vectors and can influence host populations and biodiversity. The ability to move, as suggested by flagella presence, might enhance its transmission among hosts, thereby affecting disease dynamics in ecosystems where these bacteria are present. Understanding the traits of R. massiliae str. AZT80 is essential for further studies on its role in public health and the ecology of vector-borne diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia massiliae
StrainAZT80

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia massiliae str. AZT80 plasmid pRMB, complete sequence.

Gene Summary

Adenine Count

5253 bp

Thymine Count

4926 bp

Guanine Count

2391 bp

Cytosine Count

2430 bp

Genome Length

15000 bp

Protein-coding Genes

14 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-trpNot AvailableNot AvailablePositive177298 - 177373Not Available
preprotein translocase subunit seceRMB_RS00895Not AvailablePositive177572 - 1777727829.91
transcription termination/antitermination protein nusgRMB_RS00900Not AvailablePositive177788 - 17836621746.3
50s ribosomal protein l11RMB_RS00905Not AvailablePositive178639 - 17907615345.9
50s ribosomal protein l1RMB_RS00910Not AvailablePositive179082 - 17980125606.4
50s ribosomal protein l10RMB_RS00915Not AvailablePositive179912 - 18042118118.2
50s ribosomal protein l7/l12RMB_RS00920Not AvailablePositive180616 - 18099313011.0
dna-directed rna polymerase subunit betaRMB_RS00925Not AvailablePositive181844 - 185965154257.0
dna-directed rna polymerase subunit beta'RMB_RS00930Not AvailablePositive186225 - 190343153279.0
palindromic element rpe5 domain-containing proteinRMB_RS10590Not AvailableNegative190266 - 1905149462.36

Displaying genes 231 – 240 of 1472 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

19 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002858all-trans-undecaprenyl phosphateC55H89O4PChemical structure of all-trans-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da
BASm0003971heme bC34H30FeN4O4Not available14875-96-8
Average614.484Da
Monoisotopic614.162739Da
BASm0003997Fe(II)-heme oC49H56FeN4O5Chemical structure of Fe(II)-heme oNot available
Average836.856Da
Monoisotopic836.361104Da

Displaying 1–10 of 19 metabolites

Health Effects

No health effects information available for this bacterium.