Rahnella aquatilis CIP 78.65 = ATCC 33071

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Rahnella

Description

Rahnella aquatilis CIP 78.65, also known as ATCC 33071, is a Gram-negative bacterium notable for its three replicons. This organism is part of the broader family of Enterobacteriaceae and is recognized for its role in various ecological niches, particularly in aquatic environments. The genomic data for Rahnella aquatilis CIP 78.65 are documented under the following accession numbers: NC_016818.1, NC_016819.1, and NC_016835.1. These sequences provide insight into the genetic makeup of the strain, facilitating further research into its metabolic capabilities and ecological interactions. Rahnella aquatilis has been isolated from various water sources, indicating its adaptability and potential significance in biogeochemical cycles. Its presence in aquatic systems suggests it may play a role in nutrient cycling and the degradation of organic matter. The ability of Gram-negative bacteria like Rahnella aquatilis to thrive in diverse environments underscores their ecological importance and potential utility in biotechnology applications, such as bioremediation or wastewater treatment. Understanding the traits of Rahnella aquatilis CIP 78.65 can contribute to broader studies on microbial diversity and the functionality of bacterial communities in freshwater ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusRahnella
SpeciesRahnella aquatilis
StrainCIP 78.65 = ATCC 33071

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rahnella aquatilis CIP 78.65 = ATCC 33071


Gene Summary

Adenine Count

1168113 bp

Thymine Count

1159328 bp

Guanine Count

1269691 bp

Cytosine Count

1263969 bp

Genome Length

4861101 bp

Protein-coding Genes

4243 genes

Non-Coding Genes

218 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Signal recognition particle proteinRAHAQ2_RS03525Not AvailablePositive779733 - 78109449905.6
30s ribosomal protein s16RAHAQ2_RS03530Not AvailablePositive781273 - 7815219000.93
ribosome maturation factor rimmRAHAQ2_RS03535Not AvailablePositive781540 - 78208820576.7
trna (guanosine(37)-n1)-methyltransferase trmdRAHAQ2_RS03540Not AvailablePositive782165 - 78293828862.7
50s ribosomal protein l19RAHAQ2_RS03545Not AvailablePositive782987 - 78333413176.1
Transcriptional regulatorRAHAQ2_RS24780Not AvailableNegative783426 - 7836056495.74
Tail proteinRAHAQ2_RS03550Not AvailableNegative783671 - 78475039689.8
Tail proteinRAHAQ2_RS03555Not AvailableNegative784753 - 78522316953.2
Phage tail measure proteinRAHAQ2_RS03560Not AvailableNegative785220 - 78685157527.8
Tail proteinRAHAQ2_RS03565Not AvailableNegative786844 - 7869785098.1

Displaying genes 1 – 10 of 4993 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0040463AmycolatopsisNot availableNot availableNot available
BASm0040726Lactobacillus johnsoniiNot availableNot availableNot available
BASm0040740Anaerostipes sp.Not availableNot availableNot available
BASm0040753Peptoniphilus lacrimalisNot availableNot availableNot available
BASm0040760Staphylococcus warneriNot availableNot availableNot available
BASm0040779Actinomyces sp.Not availableNot availableNot available

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.