Rahnella aquatilis CIP 78.65 = ATCC 33071

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Rahnella

Description

Rahnella aquatilis CIP 78.65, also known as ATCC 33071, is a Gram-negative bacterium notable for its three replicons. This organism is part of the broader family of Enterobacteriaceae and is recognized for its role in various ecological niches, particularly in aquatic environments. The genomic data for Rahnella aquatilis CIP 78.65 are documented under the following accession numbers: NC_016818.1, NC_016819.1, and NC_016835.1. These sequences provide insight into the genetic makeup of the strain, facilitating further research into its metabolic capabilities and ecological interactions. Rahnella aquatilis has been isolated from various water sources, indicating its adaptability and potential significance in biogeochemical cycles. Its presence in aquatic systems suggests it may play a role in nutrient cycling and the degradation of organic matter. The ability of Gram-negative bacteria like Rahnella aquatilis to thrive in diverse environments underscores their ecological importance and potential utility in biotechnology applications, such as bioremediation or wastewater treatment. Understanding the traits of Rahnella aquatilis CIP 78.65 can contribute to broader studies on microbial diversity and the functionality of bacterial communities in freshwater ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusRahnella
SpeciesRahnella aquatilis
StrainCIP 78.65 = ATCC 33071

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rahnella aquatilis CIP 78.65 = ATCC 33071, complete sequence.

Gene Summary

Adenine Count

1168113 bp

Thymine Count

1159328 bp

Guanine Count

1269691 bp

Cytosine Count

1263969 bp

Genome Length

4861101 bp

Protein-coding Genes

4243 genes

Non-Coding Genes

218 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component sensor histidine kinase baraRAHAQ2_RS03265Not AvailableNegative721164 - 723914102612.0
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdRAHAQ2_RS03270Not AvailablePositive723978 - 72534849686.8
gtp diphosphokinaseRAHAQ2_RS03275Not AvailablePositive725358 - 72759584458.0
nucleoside triphosphate pyrophosphohydrolaseRAHAQ2_RS03280Not AvailablePositive727672 - 72847530616.1
glutamine hydrolyzing ctp synthaseRAHAQ2_RS03285Not AvailablePositive728825 - 73046260190.4
phosphopyruvate hydrataseRAHAQ2_RS03290Not AvailablePositive730539 - 73184345528.4
7-carboxy-7-deazaguanine synthase queeRAHAQ2_RS03295Not AvailablePositive732011 - 73268225092.0
6-carboxytetrahydropterin synthase quedRAHAQ2_RS03300Not AvailableNegative732812 - 73317113351.0
hypothetical proteinRAHAQ2_RS03305Not AvailablePositive733341 - 73434536670.4
nadph-dependent assimilatory sulfite reductase flavoprotein subunitRAHAQ2_RS03310Not AvailablePositive734692 - 73649466854.9

Displaying genes 781 – 790 of 4993 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0040463AmycolatopsisNot availableNot availableNot available
BASm0040726Lactobacillus johnsoniiNot availableNot availableNot available
BASm0040740Anaerostipes sp.Not availableNot availableNot available
BASm0040753Peptoniphilus lacrimalisNot availableNot availableNot available
BASm0040760Staphylococcus warneriNot availableNot availableNot available
BASm0040779Actinomyces sp.Not availableNot availableNot available

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.