Acetivibrio clariflavus DSM 19732

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Acetivibrionales

Family

Acetivibrionaceae

Genus

Acetivibrio

Description

Acetivibrio clariflavus DSM 19732 is a Gram-positive, rod-shaped bacterium. It has been characterized by its single replicon structure, indicating a simpler genetic organization compared to organisms with multiple replicons. The genome of A. clariflavus is represented by the accession number NC_016627.1, which provides a reference for further genomic studies and annotation. This species is notable for its potential applications in biotechnological processes, particularly in the fermentation of organic materials. The ability of A. clariflavus to process substrates may contribute to ecological functions such as organic matter decomposition and nutrient cycling in its natural habitats. The understanding of A. clariflavus, through its specific traits, sheds light on its role within microbial communities, particularly in environments rich in organic substrates. Its Gram-positive nature suggests it may have adaptations that allow it to thrive in various ecological niches, potentially influencing the dynamics of microbial interactions and ecosystem functions.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderAcetivibrionales
FamilyAcetivibrionaceae
GenusAcetivibrio
SpeciesAcetivibrio clariflavus
StrainDSM 19732

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acetivibrio clariflavus DSM 19732, complete sequence.

Gene Summary

Adenine Count

1552325 bp

Thymine Count

1596041 bp

Guanine Count

847124 bp

Cytosine Count

902188 bp

Genome Length

4897678 bp

Protein-coding Genes

4099 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive4288255 - 4288266Not Available
Putative integraseCLOCL_RS17910Not AvailableNegative4288360 - 428992860423.6
recombinase family proteinCLOCL_RS17915Not AvailableNegative4289891 - 429034617622.1
Site-specific recombinase for integration and excisionCLOCL_RS17920Not AvailableNegative4290346 - 429191460223.4
shoct domain-containing proteinCLOCL_RS17925Not AvailableNegative4291976 - 42921948585.35
N-acetylmuramoyl-l-alanine amidaseCLOCL_RS23600Not AvailableNegative4292248 - 429325237776.3
Phage holinCLOCL_RS17935Not AvailableNegative4293249 - 429366815083.5
Minor tail proteinCLOCL_RS17940Not AvailableNegative4293755 - 429622394140.8
hypothetical proteinCLOCL_RS17945Not AvailableNegative4296220 - 429680421861.5
hypothetical proteinCLOCL_RS17950Not AvailableNegative4296882 - 429715110167.3

Displaying genes 1 – 10 of 4225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

151 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm0000738D-lyxoseC5H10O5Chemical structure of D-lyxose1114-34-7
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 151 metabolites

Health Effects

No health effects information available for this bacterium.