Azospirillum lipoferum 4B

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum lipoferum 4B is a Gram-negative bacterium known for its role in associative symbioses, particularly with the host plant Oryza sativa, commonly known as rice. This bacterium is characterized by having four replicons, indicating a complex genetic structure that may contribute to its adaptability and functionality in various environmental conditions. In the context of its biotic relationships, A. lipoferum 4B enhances plant growth and nutrient uptake, particularly nitrogen, through its associative symbiotic interaction with rice. This relationship is crucial for sustainable agriculture, as it reduces the need for synthetic fertilizers and promotes healthier crop yields. The genomic accessions associated with A. lipoferum 4B include NC_016586.1, NC_016587.1, NC_016622.1, and NC_016624.1. These sequences provide valuable insights into the genetic makeup of the bacterium, which can inform research on its metabolic capabilities and mechanisms of interaction with plant hosts. In summary, Azospirillum lipoferum 4B exemplifies the importance of microbial symbionts in agriculture, particularly in rice cultivation. Its ability to form beneficial associations with plants highlights the significance of maintaining microbial diversity in soil ecosystems, which can enhance plant health and contribute to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum lipoferum
Strain4B

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipassociative symbioses
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum lipoferum 4B


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

577 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated endonuclease cas2AZOLI_RS18730Not AvailableNegative60095 - 6038210639.9
crispr-associated endonuclease cas1AZOLI_RS18735Not AvailableNegative60397 - 6241574790.0
tigr03986 family crispr-associated ramp proteinAZOLI_RS18740Not AvailableNegative63358 - 6447940772.2
sir2 family nad-dependent protein deacylaseAZOLI_RS30460Not AvailablePositive65415 - 6710061657.7
hypothetical proteinAZOLI_RS18750Not AvailablePositive67124 - 6777724890.8
aaa family atpaseAZOLI_RS18755Not AvailablePositive67774 - 6980175992.9
type iii-b crispr module ramp protein cmr1AZOLI_RS18760Not AvailablePositive69826 - 7101043311.3
type iii-b crispr-associated protein cas10/cmr2AZOLI_RS18765Not AvailablePositive71007 - 74255118793.0
type iii-b crispr module-associated cmr3 family proteinAZOLI_RS18770Not AvailablePositive74252 - 7548743597.0
type iii-b crispr module ramp protein cmr4AZOLI_RS18775Not AvailablePositive75484 - 7647934818.6

Displaying genes 71 – 80 of 4467 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.