Azospirillum lipoferum 4B

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Azospirillaceae

Genus

Azospirillum

Description

Azospirillum lipoferum 4B is a Gram-negative bacterium known for its role in associative symbioses, particularly with the host plant Oryza sativa, commonly known as rice. This bacterium is characterized by having four replicons, indicating a complex genetic structure that may contribute to its adaptability and functionality in various environmental conditions. In the context of its biotic relationships, A. lipoferum 4B enhances plant growth and nutrient uptake, particularly nitrogen, through its associative symbiotic interaction with rice. This relationship is crucial for sustainable agriculture, as it reduces the need for synthetic fertilizers and promotes healthier crop yields. The genomic accessions associated with A. lipoferum 4B include NC_016586.1, NC_016587.1, NC_016622.1, and NC_016624.1. These sequences provide valuable insights into the genetic makeup of the bacterium, which can inform research on its metabolic capabilities and mechanisms of interaction with plant hosts. In summary, Azospirillum lipoferum 4B exemplifies the importance of microbial symbionts in agriculture, particularly in rice cultivation. Its ability to form beneficial associations with plants highlights the significance of maintaining microbial diversity in soil ecosystems, which can enhance plant health and contribute to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyAzospirillaceae
GenusAzospirillum
SpeciesAzospirillum lipoferum
Strain4B

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipassociative symbioses
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

628 genes

Non-Coding Genes

28 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pd-(d/e)xk nuclease family proteinAZOLI_RS08730Not AvailableNegative1884225 - 188696096935.8
crispr-associated endonuclease cas3''AZOLI_RS08735Not AvailablePositive1887667 - 189018992553.9
type i-u crispr-associated protein csx17AZOLI_RS08740Not AvailablePositive1890176 - 189250983703.5
type i-u crispr-associated ramp protein csb1/cas7uAZOLI_RS08745Not AvailablePositive1892499 - 189345834617.1
type i-u crispr-associated protein csb2AZOLI_RS08750Not AvailablePositive1893466 - 189519664274.4
crispr-associated endonuclease cas4/cas1AZOLI_RS08755Not AvailablePositive1895224 - 189692762357.8
crispr-associated endonuclease cas2AZOLI_RS08760Not AvailablePositive1896959 - 189725511286.8
s-methyl-5-thioribose-1-phosphate isomeraseAZOLI_RS08765Not AvailablePositive1903067 - 190426644476.8
helix-turn-helix transcriptional regulatorAZOLI_RS08770Not AvailablePositive1904648 - 19048999257.1
replication initiator protein aAZOLI_RS08775Not AvailablePositive1904909 - 190576032355.7

Displaying genes 3431 – 3440 of 4467 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.