Candidatus Arthromitus sp. SFB-mouse-Japan

Gram-negative

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Candidatus Neoarthromitus

Description

Candidatus Arthromitus sp. SFB-mouse-Japan is a Gram-negative bacterium characterized by a single replicon. It has been identified with the accession number NC_015913.1, which provides a reference for its genomic data. This organism is part of the broader group of segmented filamentous bacteria (SFB), which are known for their association with the gut microbiota of various hosts, including mice. SFB are recognized for their role in gut health, particularly in the development of the immune system and the modulation of host responses. The Gram-negative nature of Candidatus Arthromitus sp. suggests the presence of an outer membrane, which can be significant for interactions with the host's immune system. This structural characteristic is often associated with a variety of physiological functions, including nutrient transport and resistance to environmental stresses. Understanding the traits of Candidatus Arthromitus sp. SFB-mouse-Japan contributes to the broader knowledge of gut microbiota dynamics, particularly in murine models. The presence of a single replicon indicates a streamlined genomic structure, which may reflect adaptations to its specific niche within the host. In summary, Candidatus Arthromitus sp. SFB-mouse-Japan, as a Gram-negative bacterium with a single replicon, exemplifies the complex interactions within the gut microbiome and underscores the importance of such microorganisms in maintaining host health and potentially influencing immune system development.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusCandidatus Neoarthromitus
SpeciesCandidatus Arthromitus sp. SFB-mouse
Strainsp. SFB-mouse-Japan

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Arthromitus sp. SFB-mouse-Japan, complete sequence.

Gene Summary

Adenine Count

580739 bp

Thymine Count

581449 bp

Guanine Count

232586 bp

Cytosine Count

225231 bp

Genome Length

1620005 bp

Protein-coding Genes

1472 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-ribose pyranaseSFBM_RS03600Not AvailableNegative736028 - 73642314493.9
ribokinaseSFBM_RS03605Not AvailableNegative736429 - 73735833794.1
crispr-associated helicase/endonuclease cas3SFBM_RS03610Not AvailablePositive737501 - 73973285862.5
type i-c crispr-associated protein cas5cSFBM_RS03615Not AvailablePositive739750 - 74043026739.3
type i-c crispr-associated protein cas8c/csd1SFBM_RS03620Not AvailablePositive740427 - 74226269866.3
type i-c crispr-associated protein cas7/csd2SFBM_RS03625Not AvailablePositive742265 - 74312832939.4
crispr-associated protein cas4SFBM_RS03630Not AvailablePositive743115 - 74378326213.7
type i-c crispr-associated endonuclease cas1cSFBM_RS03635Not AvailablePositive743784 - 74481239640.2
crispr-associated endonuclease cas2SFBM_RS03640Not AvailablePositive744825 - 74511511061.4
duf2442 domain-containing proteinSFBM_RS03645Not AvailablePositive746369 - 7466239881.46

Displaying genes 741 – 750 of 1594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.