Collimonas fungivorans Ter331

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas fungivorans Ter331 is a soil-dwelling bacterium known for its unique ecological role in the decomposition of organic matter. This species is characterized by having a single replicon, which is indicative of its genomic structure and potential adaptability within its environment. The reference accession for Collimonas fungivorans Ter331 is NC_015856.1, which provides a basis for further genomic studies and comparisons with other microorganisms. The habitat of Collimonas fungivorans Ter331 is primarily soil, where it engages in interactions with fungal species. This bacterium is noteworthy for its ability to utilize fungi as a nutrient source, showcasing a specific trophic relationship that contributes to the cycling of nutrients in the soil ecosystem. By breaking down fungal biomass, Collimonas fungivorans Ter331 plays a significant role in the decomposition process, which is vital for soil health and fertility. In summary, Collimonas fungivorans Ter331 is an important microbial player in soil ecosystems, with its single replicon structure and association with fungi highlighting its specialized ecological niche. The bacterium exemplifies the complexity of soil microbiomes, where interactions between bacteria and fungi are crucial for nutrient cycling and maintaining soil biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas fungivorans
StrainTer331

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas fungivorans Ter331


Gene Summary

Adenine Count

1050871 bp

Thymine Count

1046907 bp

Guanine Count

1543474 bp

Cytosine Count

1545637 bp

Genome Length

5186898 bp

Protein-coding Genes

4596 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
HolinCFU_RS17370Not AvailableNegative3919815 - 392008110020.3
Putative holinCFU_RS17375Not AvailableNegative3920065 - 392042412855.7
gdsl-type esterase/lipase family proteinCFU_RS17380Not AvailableNegative3920480 - 392280181268.6
Tail fiber proteinCFU_RS17385Not AvailableNegative3922867 - 392560299137.7
Hypothetical proteinCFU_RS17390Not AvailableNegative3925602 - 392596713794.8
Hypothetical proteinCFU_RS17395Not AvailableNegative3925967 - 392647619008.7
Hypothetical proteinCFU_RS17400Not AvailableNegative3926473 - 392697017928.4
Tail tape measure proteinCFU_RS17405Not AvailableNegative3926970 - 392975997429.9
Hypothetical proteinCFU_RS17415Not AvailableNegative3930132 - 393044311462.8
Tail proteinCFU_RS17420Not AvailableNegative3930443 - 393108722428.7

Displaying genes 71 – 80 of 4744 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

15 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001785(2R,3R)-tartrateC4H6O6Chemical structure of (2R,3R)-tartrate87-69-4
Average150.0868Da
Monoisotopic150.0164379Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da

Displaying 1–10 of 15 metabolites

Health Effects

No health effects information available for this bacterium.