Nitrosomonas sp. Is79A3

Gram-negativeNAMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Nitrosomonadaceae

Genus

Nitrosomonas

Description

Nitrosomonas sp. Is79A3 is a Gram-negative, aerobic bacterium predominantly found in freshwater habitats. This organism is characterized as an oligotroph and lithotroph, deriving its energy through the oxidation of inorganic compounds, specifically ammonia. The presence of flagella indicates that Nitrosomonas sp. Is79A3 is motile, allowing it to navigate through its aquatic environment effectively. As a mesophilic organism, Nitrosomonas sp. Is79A3 thrives within a moderate temperature range, which is conducive to its metabolic activities. It possesses a single replicon, suggesting a streamlined genetic organization that may facilitate efficient reproduction and adaptation to its ecological niche. Being free-living, this bacterium does not rely on a host for survival, allowing it to occupy a variety of freshwater environments. The ecological significance of Nitrosomonas sp. Is79A3 lies in its role in the nitrogen cycle, particularly in the process of nitrification. By oxidizing ammonia, this bacterium contributes to the conversion of nitrogen compounds, thereby influencing nutrient dynamics and the overall health of freshwater ecosystems. Understanding the traits and ecological functions of Nitrosomonas sp. Is79A3 can provide insights into the microbial processes that underpin nutrient cycling in aquatic environments. Accessions for this organism can be found under NC_015731.1, which may serve as a reference for further research into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyNitrosomonadaceae
GenusNitrosomonas
SpeciesNitrosomonas sp. Is79A3
StrainIs79A3

Profile

Physiology
Gram staining propertiesNegative
ShapeNA
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceOligotroph- Lithotroph
PathogenicityNot Available

Genome Summary

Nitrosomonas sp. Is79A3


Gene Summary

Adenine Count

1033656 bp

Thymine Count

1030475 bp

Guanine Count

861970 bp

Cytosine Count

857343 bp

Genome Length

3783444 bp

Protein-coding Genes

3490 genes

Non-Coding Genes

17 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is66 family insertion sequence element accessory protein tnpaNIT79A3_RS04635Not AvailablePositive1022591 - 102288110690.0
is66 family insertion sequence element accessory protein tnpbNIT79A3_RS04640Not AvailablePositive1022872 - 102321912966.9
is66 family transposaseNIT79A3_RS04645Not AvailablePositive1023269 - 102485258812.4
transposaseNIT79A3_RS18160Not AvailableNegative1024779 - 102596944019.6
type isp restriction/modification enzymeNIT79A3_RS04660Not AvailablePositive1026053 - 102664623310.4
yifb family mg chelatase-like aaa atpaseNIT79A3_RS04665Not AvailableNegative1026705 - 102821654860.0
accessory factor ubik family proteinNIT79A3_RS04670Not AvailableNegative1028294 - 102860211776.1
phosphotransferaseNIT79A3_RS04675Not AvailablePositive1028825 - 102982938912.9
n-acetylmuramate alpha-1-phosphate uridylyltransferase muruNIT79A3_RS04680Not AvailablePositive1029813 - 103054726803.6
xaa-pro aminopeptidaseNIT79A3_RS04685Not AvailablePositive1030588 - 103189549119.5

Displaying genes 931 – 940 of 3507 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

52 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da

Displaying 1–10 of 52 metabolites

Health Effects

No health effects information available for this bacterium.