Pyrococcus yayanosii CH1

CocciMotileObligate anaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus yayanosii CH1 is a hyperthermophilic, obligate anaerobic coccus that thrives in the extreme conditions of hydrothermal vent environments. This microorganism is characterized by its mobility, facilitated by the presence of flagella, which allows it to navigate its marine habitat effectively. P. yayanosii CH1 possesses a single replicon, indicating a streamlined genomic structure that is typical for many extremophiles, potentially contributing to its adaptability in high-temperature environments. Notably, this species is nonsporulating and exists as free-living organisms, suggesting that it actively engages with its environment rather than entering a dormant state. The extreme conditions in which P. yayanosii CH1 is found, particularly its ability to thrive at high temperatures and in an oxygen-free atmosphere, highlight its ecological role in nutrient cycling within hydrothermal vent ecosystems. Such organisms are essential for the overall health of these unique habitats, as they may contribute to the degradation of organic materials and the recycling of nutrients, supporting diverse microbial communities. The genomic data, particularly accession NC_015680.1, provides a basis for further studies into the metabolic pathways and ecological functions of this species, enhancing our understanding of life in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus yayanosii
StrainCH1

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate anaerobic
Optimal temperatureNot Available
Temperature rangeHyperthermophilic
HabitatHydrothermal vent- Marine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus yayanosii CH1


Gene Summary

Adenine Count

419081 bp

Thymine Count

411215 bp

Guanine Count

446938 bp

Cytosine Count

439584 bp

Genome Length

1716818 bp

Protein-coding Genes

1884 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferasePYCH_RS00060Not AvailableNegative7865 - 902244268.4
bifunctional l-myo-inositol-1-phosphate cytidylyltransferase/cdp-l-myo-inositol myo-inositolphosphotransferasePYCH_RS00065Not AvailableNegative9001 - 1028148063.9
phosphoglycerate kinasePYCH_RS00070Not AvailableNegative10334 - 1155445719.3
hypothetical proteinPYCH_RS00075Not AvailablePositive11661 - 1243728965.5
cdc48 family aaa atpasePYCH_RS00080Not AvailablePositive12424 - 1493494098.4
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdPYCH_RS00085Not AvailableNegative14995 - 1623646721.8
tigr00289 family proteinPYCH_RS00090Not AvailableNegative16233 - 1692225961.2
c2h2-type zinc finger proteinPYCH_RS00095Not AvailableNegative17007 - 172017518.41
Trna-glyNot AvailableNot AvailablePositive17259 - 17336Not Available
pfkb family carbohydrate kinasePYCH_RS00105Not AvailablePositive17451 - 1820927864.5

Displaying genes 11 – 20 of 1945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.