Pyrococcus yayanosii CH1

CocciMotileObligate anaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus yayanosii CH1 is a hyperthermophilic, obligate anaerobic coccus that thrives in the extreme conditions of hydrothermal vent environments. This microorganism is characterized by its mobility, facilitated by the presence of flagella, which allows it to navigate its marine habitat effectively. P. yayanosii CH1 possesses a single replicon, indicating a streamlined genomic structure that is typical for many extremophiles, potentially contributing to its adaptability in high-temperature environments. Notably, this species is nonsporulating and exists as free-living organisms, suggesting that it actively engages with its environment rather than entering a dormant state. The extreme conditions in which P. yayanosii CH1 is found, particularly its ability to thrive at high temperatures and in an oxygen-free atmosphere, highlight its ecological role in nutrient cycling within hydrothermal vent ecosystems. Such organisms are essential for the overall health of these unique habitats, as they may contribute to the degradation of organic materials and the recycling of nutrients, supporting diverse microbial communities. The genomic data, particularly accession NC_015680.1, provides a basis for further studies into the metabolic pathways and ecological functions of this species, enhancing our understanding of life in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus yayanosii
StrainCH1

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate anaerobic
Optimal temperatureNot Available
Temperature rangeHyperthermophilic
HabitatHydrothermal vent- Marine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus yayanosii CH1, complete sequence.

Gene Summary

Adenine Count

419081 bp

Thymine Count

411215 bp

Guanine Count

446938 bp

Cytosine Count

439584 bp

Genome Length

1716818 bp

Protein-coding Genes

1884 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system vapc family toxinPYCH_RS08820Not AvailableNegative1611534 - 161187212730.0
hypothetical proteinPYCH_RS08825Not AvailableNegative1611833 - 161211711409.5
dhh family phosphoesterasePYCH_RS08830Not AvailablePositive1612295 - 161452083290.5
cdp-2,3-bis-(o-geranylgeranyl)-sn-glycerol synthasePYCH_RS08835Not AvailablePositive1614517 - 161501718412.9
atp-binding proteinPYCH_RS10215Not AvailableNegative1615185 - 161573020960.8
aaa family atpasePYCH_RS10220Not AvailableNegative1615966 - 161627712517.9
tigr00296 family proteinPYCH_RS08845Not AvailableNegative1616308 - 161693123785.8
Trna-proNot AvailableNot AvailablePositive1617005 - 1617082Not Available
nucleotidyltransferase domain-containing proteinPYCH_RS08855Not AvailableNegative1617127 - 161782527519.5
d-aminoacyl-trna deacylasePYCH_RS08860Not AvailablePositive1617914 - 161873230482.8

Displaying genes 1821 – 1830 of 1945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.