Pyrococcus yayanosii CH1

CocciMotileObligate anaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus yayanosii CH1 is a hyperthermophilic, obligate anaerobic coccus that thrives in the extreme conditions of hydrothermal vent environments. This microorganism is characterized by its mobility, facilitated by the presence of flagella, which allows it to navigate its marine habitat effectively. P. yayanosii CH1 possesses a single replicon, indicating a streamlined genomic structure that is typical for many extremophiles, potentially contributing to its adaptability in high-temperature environments. Notably, this species is nonsporulating and exists as free-living organisms, suggesting that it actively engages with its environment rather than entering a dormant state. The extreme conditions in which P. yayanosii CH1 is found, particularly its ability to thrive at high temperatures and in an oxygen-free atmosphere, highlight its ecological role in nutrient cycling within hydrothermal vent ecosystems. Such organisms are essential for the overall health of these unique habitats, as they may contribute to the degradation of organic materials and the recycling of nutrients, supporting diverse microbial communities. The genomic data, particularly accession NC_015680.1, provides a basis for further studies into the metabolic pathways and ecological functions of this species, enhancing our understanding of life in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus yayanosii
StrainCH1

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate anaerobic
Optimal temperatureNot Available
Temperature rangeHyperthermophilic
HabitatHydrothermal vent- Marine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus yayanosii CH1, complete sequence.

Gene Summary

Adenine Count

419081 bp

Thymine Count

411215 bp

Guanine Count

446938 bp

Cytosine Count

439584 bp

Genome Length

1716818 bp

Protein-coding Genes

1884 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ykgj family cysteine cluster proteinPYCH_RS06870Not AvailableNegative1225559 - 122607119314.7
trna uridine(34) 5-carboxymethylaminomethyl modification radical sam/gnat enzyme elp3PYCH_RS06875Not AvailableNegative1226081 - 122785068957.4
hypothetical proteinPYCH_RS06880Not AvailablePositive1227967 - 122860523569.7
sdr family nad(p)-dependent oxidoreductasePYCH_RS06885Not AvailableNegative1228602 - 122939929316.8
nicotinate phosphoribosyltransferasePYCH_RS06890Not AvailablePositive1229490 - 123066243380.8
ferredoxinPYCH_RS06895Not AvailableNegative1230673 - 12308767209.48
metal-sulfur cluster assembly factorPYCH_RS06900Not AvailableNegative1233180 - 123370119901.2
phosphoenolpyruvate carboxykinase (gtp)PYCH_RS06905Not AvailablePositive1233833 - 123571072275.9
magnesium transporterPYCH_RS06910Not AvailablePositive1235859 - 123704642498.6
potassium channel family proteinPYCH_RS06915Not AvailablePositive1237107 - 123772423013.9

Displaying genes 1411 – 1420 of 1945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.