Pyrococcus yayanosii CH1

CocciMotileObligate anaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Thermococci

Order

Thermococcales

Family

Thermococcaceae

Genus

Pyrococcus

Description

Pyrococcus yayanosii CH1 is a hyperthermophilic, obligate anaerobic coccus that thrives in the extreme conditions of hydrothermal vent environments. This microorganism is characterized by its mobility, facilitated by the presence of flagella, which allows it to navigate its marine habitat effectively. P. yayanosii CH1 possesses a single replicon, indicating a streamlined genomic structure that is typical for many extremophiles, potentially contributing to its adaptability in high-temperature environments. Notably, this species is nonsporulating and exists as free-living organisms, suggesting that it actively engages with its environment rather than entering a dormant state. The extreme conditions in which P. yayanosii CH1 is found, particularly its ability to thrive at high temperatures and in an oxygen-free atmosphere, highlight its ecological role in nutrient cycling within hydrothermal vent ecosystems. Such organisms are essential for the overall health of these unique habitats, as they may contribute to the degradation of organic materials and the recycling of nutrients, supporting diverse microbial communities. The genomic data, particularly accession NC_015680.1, provides a basis for further studies into the metabolic pathways and ecological functions of this species, enhancing our understanding of life in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassThermococci
OrderThermococcales
FamilyThermococcaceae
GenusPyrococcus
SpeciesPyrococcus yayanosii
StrainCH1

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsObligate anaerobic
Optimal temperatureNot Available
Temperature rangeHyperthermophilic
HabitatHydrothermal vent- Marine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrococcus yayanosii CH1, complete sequence.

Gene Summary

Adenine Count

419081 bp

Thymine Count

411215 bp

Guanine Count

446938 bp

Cytosine Count

439584 bp

Genome Length

1716818 bp

Protein-coding Genes

1884 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidohydrolasePYCH_RS05800Not AvailableNegative1041365 - 104250742671.7
nadp-dependent malic enzymePYCH_RS05805Not AvailablePositive1042614 - 104393047604.0
fmde family proteinPYCH_RS05810Not AvailablePositive1044117 - 104481226169.9
iron abc transporter substrate-binding proteinPYCH_RS05815Not AvailablePositive1044814 - 104593241082.6
feccd family abc transporter permeasePYCH_RS05820Not AvailablePositive1045938 - 104697236460.5
abc transporter atp-binding proteinPYCH_RS05825Not AvailablePositive1046969 - 104771527211.5
p-loop ntpasePYCH_RS05830Not AvailableNegative1047745 - 104863232001.0
p-loop ntpasePYCH_RS05835Not AvailableNegative1048633 - 104950231036.0
hypothetical proteinPYCH_RS05840Not AvailablePositive1049955 - 105077030477.0
dna cytosine methyltransferasePYCH_RS05845Not AvailablePositive1050787 - 105153227192.8

Displaying genes 1191 – 1200 of 1945 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.