Methanothermococcus okinawensis IH1

CocciMotileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanococci

Order

Methanococcales

Family

Methanococcaceae

Genus

Methanothermococcus

Description

Methanothermococcus okinawensis IH1 is a thermophilic archaeon characterized by its cocci shape and anaerobic metabolism. This organism thrives in extreme environments, specifically found in deep-sea hydrothermal vents, which are rich in nutrients and provide a unique ecological niche. M. okinawensis is both a lithotroph and an autotroph, utilizing inorganic compounds as an energy source while fixing carbon dioxide for growth. The optimal growth temperature for M. okinawensis is 60°C, and it operates within a thermophilic temperature range. This adaptation allows it to thrive in high-temperature environments where few other organisms can survive. The organism is motile, which may facilitate its movement toward optimal conditions within its habitat. M. okinawensis has two replicons, which may play a role in its genetic stability and adaptability in extreme conditions. Being free-living, it does not rely on a host for survival, which suggests it plays a significant role in nutrient cycling within its environment. The presence of M. okinawensis in hydrothermal vent ecosystems highlights the importance of extreme microorganisms in biogeochemical processes, particularly in carbon and energy cycling in environments with limited light. Its unique metabolic capabilities contribute to the overall microbial diversity and functioning of these extreme habitats. Accessions for this organism include NC_015632.1 and NC_015636.1, indicating its significance in microbial research and genomic studies.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanococci
OrderMethanococcales
FamilyMethanococcaceae
GenusMethanothermococcus
SpeciesMethanothermococcus okinawensis
StrainIH1

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature60
Temperature rangeThermophilic
HabitatFresh water- Deep sea- Hydrothermal vent
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceLithotroph- Autotroph
PathogenicityNot Available

Genome Summary

Methanothermococcus okinawensis IH1, complete sequence.

Gene Summary

Adenine Count

587222 bp

Thymine Count

588205 bp

Guanine Count

242650 bp

Cytosine Count

244448 bp

Genome Length

1662525 bp

Protein-coding Genes

1642 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbamoyl-phosphate synthase large subunitMETOK_RS08940Not AvailableNegative123586 - 12502553051.1
adp-forming succinate--coa ligase subunit betaMETOK_RS00635Not AvailableNegative125244 - 12632940487.2
aspartate carbamoyltransferase regulatory subunitMETOK_RS00640Not AvailableNegative126491 - 12697918446.0
phospholipase d-like domain-containing proteinMETOK_RS00645Not AvailableNegative127047 - 12763422749.0
adenosylcobinamide-phosphate guanylyltransferaseMETOK_RS00650Not AvailablePositive128047 - 12864022652.0
prc-barrel domain-containing proteinMETOK_RS00655Not AvailablePositive128670 - 12895410381.8
diaminopimelate epimeraseMETOK_RS00660Not AvailablePositive129124 - 13003234061.8
asparagine synthase (glutamine-hydrolyzing)METOK_RS00665Not AvailableNegative130153 - 13172160483.9
coenzyme f420-0:l-glutamate ligaseMETOK_RS00670Not AvailableNegative131915 - 13268528145.3
diaminopimelate decarboxylaseMETOK_RS00675Not AvailablePositive132979 - 13429548576.2

Displaying genes 131 – 140 of 1699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.