Desulfotomaculum nigrificans CO-1-SRB

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfotomaculaceae

Genus

Desulfotomaculum

Description

Desulfotomaculum nigrificans CO-1-SRB is a Gram-positive, spore-forming, rod-shaped bacterium that thrives in anaerobic environments, specifically within the sludge of anaerobic bioreactors treating paper mill wastewater. This organism is motile and exhibits thermophilic characteristics, with an optimal growth temperature of 45°C and a temperature range suitable for life in high-temperature conditions. As a member of the sulfate-reducing bacteria (SRB), D. nigrificans plays a crucial role in the biogeochemical cycling of sulfur in its habitat, contributing to the reduction of sulfate and the subsequent production of hydrogen sulfide, a key process in anaerobic ecosystems. The bacterium possesses a single replicon, which may reflect its streamlined genomic organization suitable for efficient metabolism in its specific ecological niche. The ability of D. nigrificans to form spores allows it to withstand adverse environmental conditions, ensuring its survival in the fluctuating conditions often found in wastewater treatment environments. This adaptability may enhance its significance in biotechnological applications, particularly in the treatment of industrial waste, where the breakdown of complex organic materials and the mitigation of undesirable compounds are essential. In summary, the presence of Desulfotomaculum nigrificans CO-1-SRB in anaerobic bioreactor sludge not only highlights its role in sulfate reduction but also emphasizes its potential application in the bioremediation of paper mill wastewater, showcasing the interplay between microbial life and industrial processes. The bacterial accession number for further reference is NC_015565.1.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfotomaculaceae
GenusDesulfotomaculum
SpeciesDesulfotomaculum nigrificans
StrainCO-1-SRB

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature45
Temperature rangethermophilic
Habitatsludge of an anaerobic bioreactor treating paper mill wastewater
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfotomaculum nigrificans CO-1-SRB


Gene Summary

Adenine Count

772092 bp

Thymine Count

771626 bp

Guanine Count

674126 bp

Cytosine Count

674411 bp

Genome Length

2892255 bp

Protein-coding Genes

2772 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide deformylaseDESCA_RS06710Not AvailablePositive1410857 - 141131216426.1
methionyl-trna formyltransferaseDESCA_RS06715Not AvailablePositive1411349 - 141230535041.9
duf116 domain-containing proteinDESCA_RS06720Not AvailablePositive1412302 - 141311129977.6
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbDESCA_RS06725Not AvailablePositive1413108 - 141446950903.3
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnDESCA_RS06730Not AvailablePositive1414472 - 141553039477.2
fhaa domain-containing proteinDESCA_RS06735Not AvailablePositive1415560 - 141635129763.3
fha domain-containing proteinDESCA_RS06740Not AvailablePositive1416353 - 141684718376.4
stp1/irep family pp2c-type ser/thr phosphataseDESCA_RS06745Not AvailablePositive1416825 - 141753825967.4
ftsw/roda/spove family cell cycle proteinDESCA_RS06750Not AvailablePositive1417564 - 141888648791.1
peptidoglycan d,d-transpeptidase ftsi family proteinDESCA_RS06755Not AvailablePositive1418870 - 142029450083.3

Displaying genes 1361 – 1370 of 2867 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.