Desulfobacca acetoxidans DSM 11109

Gram-negativeNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobaccia

Order

Desulfobaccales

Family

Desulfobaccaceae

Genus

Desulfobacca

Description

Desulfobacca acetoxidans DSM 11109 is a Gram-negative, anaerobic bacterium that thrives as a free-living organism in freshwater sludge environments. This organism exhibits a unique cell arrangement, typically forming pairs, and is characterized by its organoheterotrophic metabolism. It does not exhibit mobility, despite having flagella, indicating that the flagella may serve a different function rather than for motility. D. acetoxidans is classified as mesophilic, indicating that it grows optimally at moderate temperatures. The bacterium has a single replicon and possesses two membranes, which is consistent with its classification in the Proteobacteria phylum. Importantly, D. acetoxidans does not form spores and is not associated with pathogenicity, making it a non-pathogenic member of its microbial community. The ecological role of D. acetoxidans can be inferred from its metabolic capabilities and habitat. As an organoheterotroph, it plays a significant role in the degradation of organic matter in anaerobic freshwater environments, contributing to nutrient cycling and the maintenance of the ecosystem's health. Its presence in sludge indicates its potential importance in bioremediation processes and organic waste treatment, where it could help in breaking down complex organic compounds. The accession number for further genomic analysis of D. acetoxidans is NC_015388.1, providing a resource for studying its genetic makeup and metabolic pathways.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobaccia
OrderDesulfobaccales
FamilyDesulfobaccaceae
GenusDesulfobacca
SpeciesDesulfobacca acetoxidans
StrainDSM 11109

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water- Sludge
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs
SporulationNonsporulating
Energy sourceOrganoheterotroph
PathogenicityNo

Genome Summary

Desulfobacca acetoxidans DSM 11109, complete sequence.

Gene Summary

Adenine Count

772547 bp

Thymine Count

773819 bp

Guanine Count

868763 bp

Cytosine Count

867407 bp

Genome Length

3282536 bp

Protein-coding Genes

2917 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
opro/oprp family phosphate-selective porinDESAC_RS14075Not AvailablePositive3114235 - 311583660309.2
duf4405 domain-containing proteinDESAC_RS14080Not AvailableNegative3115917 - 311644419690.5
hypothetical proteinDESAC_RS14085Not AvailableNegative3116519 - 311698017062.0
hypothetical proteinDESAC_RS14090Not AvailableNegative3117516 - 311806719827.8
mandelate racemase/muconate lactonizing enzyme family proteinDESAC_RS14095Not AvailablePositive3118606 - 311977543002.1
formyltransferaseDESAC_RS14100Not AvailablePositive3120174 - 312112435332.1
type ii toxin-antitoxin system hica family toxinDESAC_RS14105Not AvailablePositive3121265 - 312232040399.5
polysaccharide deacetylase family proteinDESAC_RS14110Not AvailablePositive3122320 - 312323433526.9
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseDESAC_RS14115Not AvailablePositive3123231 - 312396527145.8
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseDESAC_RS14120Not AvailablePositive3123962 - 312444716664.4

Displaying genes 2831 – 2840 of 2981 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.