Desulfobacca acetoxidans DSM 11109

Gram-negativeNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobaccia

Order

Desulfobaccales

Family

Desulfobaccaceae

Genus

Desulfobacca

Description

Desulfobacca acetoxidans DSM 11109 is a Gram-negative, anaerobic bacterium that thrives as a free-living organism in freshwater sludge environments. This organism exhibits a unique cell arrangement, typically forming pairs, and is characterized by its organoheterotrophic metabolism. It does not exhibit mobility, despite having flagella, indicating that the flagella may serve a different function rather than for motility. D. acetoxidans is classified as mesophilic, indicating that it grows optimally at moderate temperatures. The bacterium has a single replicon and possesses two membranes, which is consistent with its classification in the Proteobacteria phylum. Importantly, D. acetoxidans does not form spores and is not associated with pathogenicity, making it a non-pathogenic member of its microbial community. The ecological role of D. acetoxidans can be inferred from its metabolic capabilities and habitat. As an organoheterotroph, it plays a significant role in the degradation of organic matter in anaerobic freshwater environments, contributing to nutrient cycling and the maintenance of the ecosystem's health. Its presence in sludge indicates its potential importance in bioremediation processes and organic waste treatment, where it could help in breaking down complex organic compounds. The accession number for further genomic analysis of D. acetoxidans is NC_015388.1, providing a resource for studying its genetic makeup and metabolic pathways.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobaccia
OrderDesulfobaccales
FamilyDesulfobaccaceae
GenusDesulfobacca
SpeciesDesulfobacca acetoxidans
StrainDSM 11109

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water- Sludge
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs
SporulationNonsporulating
Energy sourceOrganoheterotroph
PathogenicityNo

Genome Summary

Desulfobacca acetoxidans DSM 11109, complete sequence.

Gene Summary

Adenine Count

772547 bp

Thymine Count

773819 bp

Guanine Count

868763 bp

Cytosine Count

867407 bp

Genome Length

3282536 bp

Protein-coding Genes

2917 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alcohol dehydrogenase catalytic domain-containing proteinDESAC_RS10170Not AvailableNegative2274991 - 227597435928.1
glycosyltransferase family 4 proteinDESAC_RS10175Not AvailableNegative2275990 - 227713242741.9
ykgj family cysteine cluster proteinDESAC_RS10180Not AvailableNegative2277183 - 227795930219.9
udp-3-o-acyl-n-acetylglucosamine deacetylaseDESAC_RS10190Not AvailablePositive2278289 - 227920633808.2
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabDESAC_RS10195Not AvailableNegative2279340 - 228066249502.0
trna 2-thiouridine(34) synthase mnmaDESAC_RS10200Not AvailableNegative2280659 - 228171439092.4
pilz domain-containing proteinDESAC_RS10205Not AvailableNegative2282179 - 228253213485.1
anaerobic carbon-monoxide dehydrogenase catalytic subunitDESAC_RS10210Not AvailableNegative2283158 - 228518873223.7
formylglycine-generating enzyme family proteinDESAC_RS10215Not AvailableNegative2285369 - 228624732372.1
lps-assembly protein lptdDESAC_RS10220Not AvailablePositive2286395 - 228861484512.4

Displaying genes 2051 – 2060 of 2981 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.