Desulfobacca acetoxidans DSM 11109

Gram-negativeNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobaccia

Order

Desulfobaccales

Family

Desulfobaccaceae

Genus

Desulfobacca

Description

Desulfobacca acetoxidans DSM 11109 is a Gram-negative, anaerobic bacterium that thrives as a free-living organism in freshwater sludge environments. This organism exhibits a unique cell arrangement, typically forming pairs, and is characterized by its organoheterotrophic metabolism. It does not exhibit mobility, despite having flagella, indicating that the flagella may serve a different function rather than for motility. D. acetoxidans is classified as mesophilic, indicating that it grows optimally at moderate temperatures. The bacterium has a single replicon and possesses two membranes, which is consistent with its classification in the Proteobacteria phylum. Importantly, D. acetoxidans does not form spores and is not associated with pathogenicity, making it a non-pathogenic member of its microbial community. The ecological role of D. acetoxidans can be inferred from its metabolic capabilities and habitat. As an organoheterotroph, it plays a significant role in the degradation of organic matter in anaerobic freshwater environments, contributing to nutrient cycling and the maintenance of the ecosystem's health. Its presence in sludge indicates its potential importance in bioremediation processes and organic waste treatment, where it could help in breaking down complex organic compounds. The accession number for further genomic analysis of D. acetoxidans is NC_015388.1, providing a resource for studying its genetic makeup and metabolic pathways.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobaccia
OrderDesulfobaccales
FamilyDesulfobaccaceae
GenusDesulfobacca
SpeciesDesulfobacca acetoxidans
StrainDSM 11109

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatFresh water- Sludge
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs
SporulationNonsporulating
Energy sourceOrganoheterotroph
PathogenicityNo

Genome Summary

Desulfobacca acetoxidans DSM 11109, complete sequence.

Gene Summary

Adenine Count

772547 bp

Thymine Count

773819 bp

Guanine Count

868763 bp

Cytosine Count

867407 bp

Genome Length

3282536 bp

Protein-coding Genes

2917 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit nuofDESAC_RS05280Not AvailableNegative1228748 - 123059266776.6
formate dehydrogenase subunit alphaDESAC_RS05285Not AvailableNegative1230662 - 123335898238.0
abrb/maze/spovt family dna-binding domain-containing proteinDESAC_RS05290Not AvailablePositive1234198 - 12344469236.26
type ii toxin-antitoxin system pemk/mazf family toxinDESAC_RS05295Not AvailablePositive1234452 - 123477512034.8
nadh-quinone oxidoreductase subunit nuofDESAC_RS05300Not AvailableNegative1234830 - 123667166708.6
formate dehydrogenase subunit alphaDESAC_RS05305Not AvailableNegative1236685 - 123937898776.5
nadh-quinone oxidoreductase subunit nuofDESAC_RS05310Not AvailableNegative1240161 - 124200266621.4
formate dehydrogenase subunit alphaDESAC_RS15695Not AvailableNegative1242016 - 124470998069.2
hypothetical proteinDESAC_RS05325Not AvailablePositive1245361 - 124568111443.3
abc transporter atp-binding proteinDESAC_RS05330Not AvailablePositive1246372 - 124710627182.2

Displaying genes 1081 – 1090 of 2981 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.