Candidatus Pelagibacter sp. IMCC9063

Gram-negativeBacilliAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Candidatus Pelagibacter

Description

Candidatus Pelagibacter sp. IMCC9063 is a marine, aerobic, gram-negative bacterium characterized by its bacilli shape and mesophilic temperature range. This organism has a single replicon and is categorized as free-living, indicating it does not depend on a host for survival. The habitat of Candidatus Pelagibacter sp. IMCC9063 is specifically marine environments, suggesting its adaptation to oceanic conditions. Its aerobic nature implies that it requires oxygen for metabolic processes, which aligns with its ecological role in marine ecosystems. The organism's single replicon may reflect a streamlined genome, often seen in bacteria that thrive in specific niches with limited resources. This characteristic can contribute to its efficiency in nutrient utilization, particularly in oligotrophic marine environments where such adaptations are crucial for survival. Understanding the ecological role of Candidatus Pelagibacter sp. IMCC9063 can provide insights into marine biogeochemical cycles, particularly in relation to carbon and nutrient cycling. As a free-living bacterium in the ocean, it likely plays a significant part in maintaining the microbial community structure and influencing the overall health of marine ecosystems. Its presence can serve as an indicator of environmental conditions and changes within the marine biosphere. Accessions for this bacterium are available under NC_015380.1, which provides a reference for further genetic and functional studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCandidatus Pelagibacterales
FamilyCandidatus Pelagibacteraceae
GenusCandidatus Pelagibacter
SpeciesCandidatus Pelagibacter sp. IMCC9063
StrainIMCC9063

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMarine
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Pelagibacter sp. IMCC9063, complete sequence.

Gene Summary

Adenine Count

433874 bp

Thymine Count

443971 bp

Guanine Count

202998 bp

Cytosine Count

203884 bp

Genome Length

1284727 bp

Protein-coding Genes

1395 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s5SAR11G3_RS05685Not AvailableNegative1069339 - 106983617307.5
50s ribosomal protein l18SAR11G3_RS05690Not AvailableNegative1069839 - 107018012787.6
50s ribosomal protein l6SAR11G3_RS05695Not AvailableNegative1070181 - 107071719752.4
30s ribosomal protein s8SAR11G3_RS05700Not AvailableNegative1070723 - 107112414950.4
30s ribosomal protein s14SAR11G3_RS05705Not AvailableNegative1071148 - 107145311769.0
50s ribosomal protein l5SAR11G3_RS05710Not AvailableNegative1071453 - 107200720908.8
50s ribosomal protein l24SAR11G3_RS05715Not AvailableNegative1072013 - 107243215634.5
50s ribosomal protein l14SAR11G3_RS05720Not AvailableNegative1072432 - 107280013377.7
30s ribosomal protein s17SAR11G3_RS05725Not AvailableNegative1072797 - 10730338921.01
50s ribosomal protein l29SAR11G3_RS05730Not AvailableNegative1073033 - 10732247380.19

Displaying genes 1191 – 1200 of 1433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.