Prevotella denticola F0289

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Prevotella

Description

Prevotella denticola F0289 is a Gram-negative, anaerobic bacterium characterized by its bacilli shape. It is non-motile and does not possess flagella, indicating that it relies on other mechanisms for movement within its habitat. This organism is classified as mesophilic, thriving in moderate temperature conditions, which is typical for many human-associated bacteria. The habitat of Prevotella denticola F0289 is host-associated, suggesting a close relationship with its environment, likely within the human oral cavity or gastrointestinal tract. It has a single replicon and is non-sporulating, highlighting its reliance on a stable environment for growth and reproduction. Prevotella denticola is known to be free-living, which can indicate its role in various biological interactions within its host. Its presence in the microbiome can be associated with both health and disease, particularly in the context of periodontal diseases and oral health. Understanding the traits of Prevotella denticola F0289 offers insights into its ecological niche. Its anaerobic nature and association with host environments suggest it plays a significant role in the microbial community dynamics within the human body. The study of such bacteria contributes to our understanding of microbial ecology and the complex relationships that exist within the human microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusPrevotella
SpeciesPrevotella denticola
StrainF0289

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Prevotella denticola F0289
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella denticola F0289, complete sequence.

Gene Summary

Adenine Count

724269 bp

Thymine Count

733931 bp

Guanine Count

742977 bp

Cytosine Count

736412 bp

Genome Length

2937589 bp

Protein-coding Genes

2247 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tir domain-containing proteinHMPREF9137_RS10455Not AvailableNegative2638737 - 263921918263.9
tir domain-containing proteinHMPREF9137_RS10460Not AvailableNegative2639288 - 263997426781.5
hypothetical proteinHMPREF9137_RS10465Not AvailableNegative2639981 - 264057722855.7
toll/interleukin-1 receptor domain-containing proteinHMPREF9137_RS10470Not AvailableNegative2640556 - 264173145795.9
type ii crispr-associated endonuclease cas1HMPREF9137_RS12500Not AvailableNegative2641886 - 264232215287.4
duf3408 domain-containing proteinHMPREF9137_RS10480Not AvailableNegative2642431 - 264285916780.3
conjugal transfer protein mobaHMPREF9137_RS10485Not AvailablePositive2643680 - 264403914038.1
rtec domain-containing proteinHMPREF9137_RS10490Not AvailableNegative2644123 - 264444912399.2
mate family efflux transporterHMPREF9137_RS10495Not AvailableNegative2644735 - 264609649399.4
arac family transcriptional regulatorHMPREF9137_RS10500Not AvailableNegative2646193 - 264704132317.5

Displaying genes 2071 – 2080 of 2313 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

313 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da

Displaying 1–10 of 313 metabolites

Health Effects

No health effects information available for this bacterium.