Neisseria lactamica 020-06

Gram-negativeCocciNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Neisseria

Description

Neisseria lactamica 020-06 is a Gram-negative, aerobic cocci bacterium that typically exists in pairs. It is classified as a chemoheterotroph, meaning it derives its energy from organic compounds. This species is non-motile and does not produce flagella, which is consistent with its free-living lifestyle. N. lactamica is mesophilic, with an optimal growth temperature of 35°C, and it thrives within a temperature range suitable for many human-associated microorganisms. The organism possesses a single replicon and is characterized by having two membranes, a common feature among Gram-negative bacteria. Importantly, N. lactamica 020-06 does not exhibit pathogenicity, suggesting that it is not associated with disease in humans, its primary host. This non-pathogenic nature is notable as it enables N. lactamica to coexist within the human microbiome without causing harm. The ecological role of Neisseria lactamica can be significant in maintaining microbial balance within its habitat. By residing in the human nasal cavity and throat, it may contribute to the competitive exclusion of pathogenic species, thereby playing a protective role. Its presence in multiple habitats highlights its adaptability and potential significance in various ecosystems, particularly in relation to human health. The accession number for this strain is NC_014752.1, which can be used for further genomic studies and comparisons.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria lactamica
StrainST-640

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Neisseria lactamica 020-06
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementPairs
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Neisseria lactamica 020-06, complete sequence.

Gene Summary

Adenine Count

533832 bp

Thymine Count

525952 bp

Guanine Count

580974 bp

Cytosine Count

579848 bp

Genome Length

2220606 bp

Protein-coding Genes

2098 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dethiobiotin synthaseNLA_RS07810Q9JV95Negative1624848 - 162549523722.8
adenosylmethionine--8-amino-7-oxononanoate transaminaseNLA_RS07815Q8A7T2Negative1625492 - 162679348096.1
fxsa family proteinNLA_RS07820Not AvailableNegative1626966 - 162745417547.6
hypothetical proteinNLA_RS07825Not AvailableNegative1627631 - 162793911317.3
integration host factor subunit alphaNLA_RS07830Q5F9T5Negative1627923 - 162822511461.8
phenylalanine--trna ligase subunit betaNLA_RS07835Q9JVA0Negative1628298 - 163066185949.3
dna cytosine methyltransferaseNLA_RS07840P15446Negative1630958 - 163204640848.5
very short patch repair endonucleaseNLA_RS07845Q9RLM5Negative1632024 - 163246117025.7
phenylalanine--trna ligase subunit alphaNLA_RS07850Q9JR76Negative1632780 - 163377237427.5
50s ribosomal protein l20NLA_RS07855Q5F9U1Negative1634022 - 163438113682.9

Displaying genes 1621 – 1630 of 2214 in total

Metabolites

1747 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 1747 metabolites

Health Effects

No health effects information available for this bacterium.