Pseudofrankia inefficax

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Pseudofrankia

Description

Pseudofrankia inefficax is characterized by having a single replicon, which is a notable trait for its genomic organization. The organism's genetic information is encoded in a single circular chromosome, as indicated by its accession number NC_014666.1. This genetic structure can influence various cellular processes, including replication and gene expression. The single replicon may confer certain advantages in terms of genomic stability and replication efficiency. In prokaryotic organisms, such as Pseudofrankia inefficax, a streamlined genomic architecture can facilitate faster growth rates and adaptability to fluctuating environmental conditions. While specific ecological roles or interactions of Pseudofrankia inefficax are not detailed in the provided data, the traits associated with single-replicon organisms often suggest a capacity for rapid adaptation. Such adaptability may be essential for survival in diverse ecological niches, potentially allowing Pseudofrankia inefficax to thrive in environments where resources are limited or competition is high. In summary, Pseudofrankia inefficax possesses a single replicon, which may play a critical role in its biological and ecological capabilities, particularly in terms of genomic efficiency and adaptability within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusPseudofrankia
SpeciesPseudofrankia inefficax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudofrankia inefficax, complete sequence.

Gene Summary

Adenine Count

1219199 bp

Thymine Count

1221538 bp

Guanine Count

3185199 bp

Cytosine Count

3189845 bp

Genome Length

8815781 bp

Protein-coding Genes

7183 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFRAEUI1C_RS39305Not AvailablePositive1085156 - 108581223316.1
hypothetical proteinFRAEUI1C_RS40075Not AvailablePositive1086608 - 108712019050.7
tir domain-containing proteinFRAEUI1C_RS04315Not AvailableNegative1087503 - 108909857146.0
trypco2 family proteinFRAEUI1C_RS04320Not AvailablePositive1089518 - 108985311133.2
trypsin-like peptidase domain-containing proteinFRAEUI1C_RS04325Not AvailablePositive1089857 - 1093690132729.0
mfs transporterFRAEUI1C_RS04330Not AvailablePositive1093842 - 109503838705.4
class i sam-dependent methyltransferaseFRAEUI1C_RS04335Not AvailableNegative1095134 - 109579324143.5
srpbcc domain-containing proteinFRAEUI1C_RS04340Not AvailableNegative1095914 - 109633915620.2
helix-turn-helix transcriptional regulatorFRAEUI1C_RS04345Not AvailableNegative1096332 - 109669413243.7
tigr03086 family metal-binding proteinFRAEUI1C_RS04350Not AvailableNegative1096691 - 109726319565.3

Displaying genes 881 – 890 of 7251 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.