Pseudofrankia inefficax

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Pseudofrankia

Description

Pseudofrankia inefficax is characterized by having a single replicon, which is a notable trait for its genomic organization. The organism's genetic information is encoded in a single circular chromosome, as indicated by its accession number NC_014666.1. This genetic structure can influence various cellular processes, including replication and gene expression. The single replicon may confer certain advantages in terms of genomic stability and replication efficiency. In prokaryotic organisms, such as Pseudofrankia inefficax, a streamlined genomic architecture can facilitate faster growth rates and adaptability to fluctuating environmental conditions. While specific ecological roles or interactions of Pseudofrankia inefficax are not detailed in the provided data, the traits associated with single-replicon organisms often suggest a capacity for rapid adaptation. Such adaptability may be essential for survival in diverse ecological niches, potentially allowing Pseudofrankia inefficax to thrive in environments where resources are limited or competition is high. In summary, Pseudofrankia inefficax possesses a single replicon, which may play a critical role in its biological and ecological capabilities, particularly in terms of genomic efficiency and adaptability within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusPseudofrankia
SpeciesPseudofrankia inefficax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudofrankia inefficax, complete sequence.

Gene Summary

Adenine Count

1219199 bp

Thymine Count

1221538 bp

Guanine Count

3185199 bp

Cytosine Count

3189845 bp

Genome Length

8815781 bp

Protein-coding Genes

7183 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma factor sigfFRAEUI1C_RS38055Not AvailableNegative1008881 - 101006242186.1
anti-sigma factorFRAEUI1C_RS04065Not AvailableNegative1010059 - 101058617791.0
gnat family n-acetyltransferaseFRAEUI1C_RS04070Not AvailableNegative1011090 - 101162019053.5
superoxide dismutase, niFRAEUI1C_RS04075Not AvailableNegative1011701 - 101209914823.6
s24/s26 family peptidaseFRAEUI1C_RS04080Not AvailablePositive1012275 - 101260111768.2
dtdp-4-dehydrorhamnose 3,5-epimerase family proteinFRAEUI1C_RS04085Not AvailableNegative1012562 - 101317922011.9
amino acid abc transporter atp-binding proteinFRAEUI1C_RS04090Not AvailableNegative1013270 - 101402227939.1
amino acid abc transporter permeaseFRAEUI1C_RS04095Not AvailableNegative1014112 - 101498731818.7
abc transporter substrate-binding proteinFRAEUI1C_RS04100Not AvailableNegative1015085 - 101602031508.1
malic enzyme-like nad(p)-binding proteinFRAEUI1C_RS04105Not AvailablePositive1016776 - 101797841140.2

Displaying genes 831 – 840 of 7251 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.