Pseudofrankia inefficax

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Pseudofrankia

Description

Pseudofrankia inefficax is characterized by having a single replicon, which is a notable trait for its genomic organization. The organism's genetic information is encoded in a single circular chromosome, as indicated by its accession number NC_014666.1. This genetic structure can influence various cellular processes, including replication and gene expression. The single replicon may confer certain advantages in terms of genomic stability and replication efficiency. In prokaryotic organisms, such as Pseudofrankia inefficax, a streamlined genomic architecture can facilitate faster growth rates and adaptability to fluctuating environmental conditions. While specific ecological roles or interactions of Pseudofrankia inefficax are not detailed in the provided data, the traits associated with single-replicon organisms often suggest a capacity for rapid adaptation. Such adaptability may be essential for survival in diverse ecological niches, potentially allowing Pseudofrankia inefficax to thrive in environments where resources are limited or competition is high. In summary, Pseudofrankia inefficax possesses a single replicon, which may play a critical role in its biological and ecological capabilities, particularly in terms of genomic efficiency and adaptability within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusPseudofrankia
SpeciesPseudofrankia inefficax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudofrankia inefficax


Gene Summary

Adenine Count

1219199 bp

Thymine Count

1221538 bp

Guanine Count

3185199 bp

Cytosine Count

3189845 bp

Genome Length

8815781 bp

Protein-coding Genes

7183 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferaseFRAEUI1C_RS00225Not AvailableNegative49394 - 5027530750.7
osmc family proteinFRAEUI1C_RS37075Not AvailableNegative50278 - 5162747653.5
hded family acid-resistance proteinFRAEUI1C_RS00235Not AvailablePositive51823 - 5244021276.3
class i sam-dependent methyltransferaseFRAEUI1C_RS00240Not AvailableNegative52431 - 5366942513.2
polysaccharide biosynthesis tyrosine autokinaseFRAEUI1C_RS00245Not AvailablePositive53976 - 5566759207.9
glycosyltransferase family 4 proteinFRAEUI1C_RS00250Not AvailablePositive55780 - 5718050086.1
sdr family oxidoreductaseFRAEUI1C_RS00255Not AvailablePositive57180 - 5810633455.2
non-hydrolyzing udp-n-acetylglucosamine 2-epimeraseFRAEUI1C_RS00260Not AvailablePositive58225 - 5955047832.4
protein phosphatase 2c domain-containing proteinFRAEUI1C_RS00265Not AvailablePositive59630 - 6047227454.5
duf4232 domain-containing proteinFRAEUI1C_RS35765Not AvailablePositive60627 - 6143326214.9

Displaying genes 61 – 70 of 7251 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.