Pseudofrankia inefficax

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Pseudofrankia

Description

Pseudofrankia inefficax is characterized by having a single replicon, which is a notable trait for its genomic organization. The organism's genetic information is encoded in a single circular chromosome, as indicated by its accession number NC_014666.1. This genetic structure can influence various cellular processes, including replication and gene expression. The single replicon may confer certain advantages in terms of genomic stability and replication efficiency. In prokaryotic organisms, such as Pseudofrankia inefficax, a streamlined genomic architecture can facilitate faster growth rates and adaptability to fluctuating environmental conditions. While specific ecological roles or interactions of Pseudofrankia inefficax are not detailed in the provided data, the traits associated with single-replicon organisms often suggest a capacity for rapid adaptation. Such adaptability may be essential for survival in diverse ecological niches, potentially allowing Pseudofrankia inefficax to thrive in environments where resources are limited or competition is high. In summary, Pseudofrankia inefficax possesses a single replicon, which may play a critical role in its biological and ecological capabilities, particularly in terms of genomic efficiency and adaptability within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusPseudofrankia
SpeciesPseudofrankia inefficax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudofrankia inefficax, complete sequence.

Gene Summary

Adenine Count

1219199 bp

Thymine Count

1221538 bp

Guanine Count

3185199 bp

Cytosine Count

3189845 bp

Genome Length

8815781 bp

Protein-coding Genes

7183 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotidyltransferase family proteinFRAEUI1C_RS24750Not AvailableNegative6138954 - 614001537663.4
pqqd family proteinFRAEUI1C_RS24755Not AvailablePositive6140362 - 614078714859.3
lasso peptide biosynthesis b2 proteinFRAEUI1C_RS24760Not AvailablePositive6140784 - 614126617066.3
asparagine synthetase b family proteinFRAEUI1C_RS24765Not AvailablePositive6141263 - 614323968320.6
imidazole glycerol phosphate synthase subunit hishFRAEUI1C_RS24770Not AvailableNegative6143265 - 614387920871.9
imidazoleglycerol-phosphate dehydratase hisbFRAEUI1C_RS24775Not AvailableNegative6143965 - 614455821201.4
histidinol-phosphate transaminaseFRAEUI1C_RS24780Not AvailableNegative6144564 - 614574842298.4
histidinol dehydrogenaseFRAEUI1C_RS24785Not AvailableNegative6145888 - 614722846804.8
bis-aminopropyl spermidine synthase family proteinFRAEUI1C_RS40450Not AvailablePositive6147438 - 614938467076.5
response regulator transcription factorFRAEUI1C_RS24795Not AvailablePositive6149387 - 615023530018.9

Displaying genes 5021 – 5030 of 7251 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.