Pseudofrankia inefficax

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Pseudofrankia

Description

Pseudofrankia inefficax is characterized by having a single replicon, which is a notable trait for its genomic organization. The organism's genetic information is encoded in a single circular chromosome, as indicated by its accession number NC_014666.1. This genetic structure can influence various cellular processes, including replication and gene expression. The single replicon may confer certain advantages in terms of genomic stability and replication efficiency. In prokaryotic organisms, such as Pseudofrankia inefficax, a streamlined genomic architecture can facilitate faster growth rates and adaptability to fluctuating environmental conditions. While specific ecological roles or interactions of Pseudofrankia inefficax are not detailed in the provided data, the traits associated with single-replicon organisms often suggest a capacity for rapid adaptation. Such adaptability may be essential for survival in diverse ecological niches, potentially allowing Pseudofrankia inefficax to thrive in environments where resources are limited or competition is high. In summary, Pseudofrankia inefficax possesses a single replicon, which may play a critical role in its biological and ecological capabilities, particularly in terms of genomic efficiency and adaptability within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusPseudofrankia
SpeciesPseudofrankia inefficax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudofrankia inefficax, complete sequence.

Gene Summary

Adenine Count

1219199 bp

Thymine Count

1221538 bp

Guanine Count

3185199 bp

Cytosine Count

3189845 bp

Genome Length

8815781 bp

Protein-coding Genes

7183 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5'-3' exonuclease h3th domain-containing proteinFRAEUI1C_RS18155Not AvailablePositive4485185 - 448625236709.7
had-ib family hydrolaseFRAEUI1C_RS18160Not AvailablePositive4486660 - 448898784100.0
zinc-binding dehydrogenaseFRAEUI1C_RS18165Not AvailablePositive4488984 - 449028544348.0
lactate racemase domain-containing proteinFRAEUI1C_RS18170Not AvailablePositive4490455 - 449203559444.7
lysophospholipid acyltransferase family proteinFRAEUI1C_RS18175Not AvailablePositive4492032 - 449301534537.3
hypothetical proteinFRAEUI1C_RS39640Not AvailablePositive4493653 - 449394610306.3
hypothetical proteinFRAEUI1C_RS18185Not AvailablePositive4494241 - 449530236418.6
sdr family nad(p)-dependent oxidoreductaseFRAEUI1C_RS18190Not AvailableNegative4495307 - 449629635380.5
mfs transporterFRAEUI1C_RS18195Not AvailableNegative4496629 - 449825453595.0
marr family winged helix-turn-helix transcriptional regulatorFRAEUI1C_RS18200Not AvailablePositive4498421 - 449901120968.6

Displaying genes 3691 – 3700 of 7251 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.