Pseudofrankia inefficax

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Pseudofrankia

Description

Pseudofrankia inefficax is characterized by having a single replicon, which is a notable trait for its genomic organization. The organism's genetic information is encoded in a single circular chromosome, as indicated by its accession number NC_014666.1. This genetic structure can influence various cellular processes, including replication and gene expression. The single replicon may confer certain advantages in terms of genomic stability and replication efficiency. In prokaryotic organisms, such as Pseudofrankia inefficax, a streamlined genomic architecture can facilitate faster growth rates and adaptability to fluctuating environmental conditions. While specific ecological roles or interactions of Pseudofrankia inefficax are not detailed in the provided data, the traits associated with single-replicon organisms often suggest a capacity for rapid adaptation. Such adaptability may be essential for survival in diverse ecological niches, potentially allowing Pseudofrankia inefficax to thrive in environments where resources are limited or competition is high. In summary, Pseudofrankia inefficax possesses a single replicon, which may play a critical role in its biological and ecological capabilities, particularly in terms of genomic efficiency and adaptability within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusPseudofrankia
SpeciesPseudofrankia inefficax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudofrankia inefficax, complete sequence.

Gene Summary

Adenine Count

1219199 bp

Thymine Count

1221538 bp

Guanine Count

3185199 bp

Cytosine Count

3189845 bp

Genome Length

8815781 bp

Protein-coding Genes

7183 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phage holin family proteinFRAEUI1C_RS01660Not AvailablePositive412045 - 41265020833.6
alpha/beta fold hydrolaseFRAEUI1C_RS01665Not AvailablePositive412775 - 41369833810.2
marp family serine proteaseFRAEUI1C_RS01670Not AvailableNegative413699 - 41488040188.3
cupredoxin domain-containing proteinFRAEUI1C_RS01675Not AvailableNegative414922 - 41530212889.6
coa pyrophosphataseFRAEUI1C_RS35840Not AvailableNegative415392 - 41626729521.4
endonuclease iiiFRAEUI1C_RS01685Not AvailableNegative416264 - 41707929233.1
hypothetical proteinFRAEUI1C_RS01690Not AvailableNegative417215 - 4174518760.77
crp/fnr family transcriptional regulatorFRAEUI1C_RS01695Not AvailablePositive417670 - 41835924973.0
tetratricopeptide repeat proteinFRAEUI1C_RS01700Not AvailableNegative418409 - 422176132384.0
mbl fold metallo-hydrolaseFRAEUI1C_RS01705Not AvailableNegative422576 - 42342428929.2

Displaying genes 351 – 360 of 7251 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.