Pseudofrankia inefficax

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Pseudofrankia

Description

Pseudofrankia inefficax is characterized by having a single replicon, which is a notable trait for its genomic organization. The organism's genetic information is encoded in a single circular chromosome, as indicated by its accession number NC_014666.1. This genetic structure can influence various cellular processes, including replication and gene expression. The single replicon may confer certain advantages in terms of genomic stability and replication efficiency. In prokaryotic organisms, such as Pseudofrankia inefficax, a streamlined genomic architecture can facilitate faster growth rates and adaptability to fluctuating environmental conditions. While specific ecological roles or interactions of Pseudofrankia inefficax are not detailed in the provided data, the traits associated with single-replicon organisms often suggest a capacity for rapid adaptation. Such adaptability may be essential for survival in diverse ecological niches, potentially allowing Pseudofrankia inefficax to thrive in environments where resources are limited or competition is high. In summary, Pseudofrankia inefficax possesses a single replicon, which may play a critical role in its biological and ecological capabilities, particularly in terms of genomic efficiency and adaptability within its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusPseudofrankia
SpeciesPseudofrankia inefficax
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudofrankia inefficax, complete sequence.

Gene Summary

Adenine Count

1219199 bp

Thymine Count

1221538 bp

Guanine Count

3185199 bp

Cytosine Count

3189845 bp

Genome Length

8815781 bp

Protein-coding Genes

7183 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ammonium transporterFRAEUI1C_RS10325Not AvailableNegative2529836 - 253108043393.1
abc transporter substrate-binding proteinFRAEUI1C_RS10330Not AvailableNegative2531490 - 253266240455.9
dna polymerase iii subunit betaFRAEUI1C_RS10335Not AvailablePositive2533241 - 253441940966.2
lysr family transcriptional regulatorFRAEUI1C_RS10340Not AvailableNegative2534416 - 253544736657.7
succinate dehydrogenase cytochrome b subunitFRAEUI1C_RS10345Not AvailablePositive2535531 - 253625326084.4
fumarate reductase/succinate dehydrogenase flavoprotein subunitFRAEUI1C_RS10350Not AvailablePositive2536320 - 253825471047.9
succinate dehydrogenase/fumarate reductase iron-sulfur subunitFRAEUI1C_RS10355Not AvailablePositive2538251 - 253900026675.9
n-acetyltransferaseFRAEUI1C_RS10360Not AvailableNegative2539142 - 253965118453.2
sco2525 family sam-dependent methyltransferaseFRAEUI1C_RS10365Not AvailablePositive2540283 - 254114031810.1
sco2524 family proteinFRAEUI1C_RS10370Not AvailablePositive2541160 - 254300468027.7

Displaying genes 2101 – 2110 of 7251 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.