Paenibacillus polymyxa SC2

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus polymyxa SC2 is a Gram-positive, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, enabling it to thrive in various oxygen conditions. This species is classified as a chemoheterotroph, utilizing organic compounds as its energy source. P. polymyxa SC2 is known for its mobility, attributed to the presence of flagella, which allows it to navigate through its diverse habitats. This bacterium operates optimally at 37°C and falls within the mesophilic temperature range, indicating its adaptability to moderate temperature environments. P. polymyxa SC2 is free-living and non-pathogenic, making it a safe organism for study and potential applications. Notably, it is capable of sporulation, a process that allows it to withstand unfavorable conditions and contribute to its resilience in various ecosystems. With two replicons and a single membrane, P. polymyxa SC2's genetic architecture supports its metabolic versatility and adaptability. The organism's ability to thrive in multiple habitats while being free-living suggests its ecological significance, particularly in nutrient cycling and soil health. The presence of this bacterium in diverse environments underscores its potential role in promoting plant growth and enhancing soil fertility, making it an important subject for further research in microbiology and agricultural science. Accessions for this strain include NC_014622.2 and NC_014628.2, providing a basis for genomic studies and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
StrainSC2

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Paenibacillus polymyxa SC2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence.

Gene Summary

Adenine Count

160302 bp

Thymine Count

157958 bp

Guanine Count

95876 bp

Cytosine Count

95982 bp

Genome Length

510118 bp

Protein-coding Genes

598 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr01457 family had-type hydrolasePPSC2_RS42410Not AvailableNegative3101852 - 310267929604.6
ribonuclease zPPSC2_RS42415Not AvailableNegative3103165 - 310409734337.3
methionine synthasePPSC2_RS42420Not AvailableNegative3104177 - 3107617126287.0
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenasePPSC2_RS42425Not AvailablePositive3107899 - 310844120724.5
had family hydrolasePPSC2_RS42430Not AvailableNegative3108540 - 310933429634.1
hypothetical proteinPPSC2_RS42435Not AvailableNegative3109492 - 311000119246.1
duf896 domain-containing proteinPPSC2_RS42440Not AvailableNegative3110116 - 31103227906.21
lysm peptidoglycan-binding domain-containing proteinPPSC2_RS42445Not AvailableNegative3110431 - 311079913784.2
transcriptional repressor lexaPPSC2_RS42450Not AvailablePositive3110989 - 311161523167.7
hypothetical proteinPPSC2_RS59480Not AvailablePositive3112034 - 31121986153.68

Displaying genes 3521 – 3530 of 5861 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.