Paenibacillus polymyxa SC2

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus polymyxa SC2 is a Gram-positive, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, enabling it to thrive in various oxygen conditions. This species is classified as a chemoheterotroph, utilizing organic compounds as its energy source. P. polymyxa SC2 is known for its mobility, attributed to the presence of flagella, which allows it to navigate through its diverse habitats. This bacterium operates optimally at 37°C and falls within the mesophilic temperature range, indicating its adaptability to moderate temperature environments. P. polymyxa SC2 is free-living and non-pathogenic, making it a safe organism for study and potential applications. Notably, it is capable of sporulation, a process that allows it to withstand unfavorable conditions and contribute to its resilience in various ecosystems. With two replicons and a single membrane, P. polymyxa SC2's genetic architecture supports its metabolic versatility and adaptability. The organism's ability to thrive in multiple habitats while being free-living suggests its ecological significance, particularly in nutrient cycling and soil health. The presence of this bacterium in diverse environments underscores its potential role in promoting plant growth and enhancing soil fertility, making it an important subject for further research in microbiology and agricultural science. Accessions for this strain include NC_014622.2 and NC_014628.2, providing a basis for genomic studies and biotechnological applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
StrainSC2

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Paenibacillus polymyxa SC2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Paenibacillus polymyxa SC2 plasmid pSC2, complete sequence.

Gene Summary

Adenine Count

160302 bp

Thymine Count

157958 bp

Guanine Count

95876 bp

Cytosine Count

95982 bp

Genome Length

510118 bp

Protein-coding Genes

598 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2500 domain-containing proteinPPSC2_RS41920Not AvailableNegative2993835 - 299423015382.4
hypothetical proteinPPSC2_RS41925Not AvailableNegative2994419 - 29946017260.32
wd40/yvtn/bnr-like repeat-containing proteinPPSC2_RS41930Not AvailableNegative2994754 - 299600445576.6
amino acid permeasePPSC2_RS41935Not AvailableNegative2996169 - 299756049568.1
l-lactate dehydrogenasePPSC2_RS41940Not AvailablePositive2997793 - 299872233782.6
duf3900 domain-containing proteinPPSC2_RS41945Not AvailableNegative2998846 - 299994942524.0
mfs transporterPPSC2_RS41950Not AvailablePositive3000344 - 300155844327.6
endonuclease muts2PPSC2_RS41955Not AvailablePositive3002278 - 300423972680.7
rok family proteinPPSC2_RS41960Not AvailableNegative3004386 - 300529132736.9
had-iib family hydrolasePPSC2_RS41965Not AvailableNegative3005360 - 300616630361.2

Displaying genes 3421 – 3430 of 5861 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.