Desulfarculus baarsii DSM 2075

Gram-negativeMotileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfarculia

Order

Desulfarculales

Family

Desulfarculaceae

Genus

Desulfarculus

Description

Desulfarculus baarsii DSM 2075 is a Gram-negative, anaerobic bacterium found in mud habitats. This organism is characterized by its mesophilic temperature range, indicating it thrives in moderate temperature conditions. D. baarsii possesses a unique structural feature of having two membranes, which is typical of Gram-negative bacteria. The bacterium exhibits mobility, facilitated by the presence of flagella. This motility aids in its ability to navigate its anaerobic environment, potentially influencing its interactions with surrounding microorganisms and substrates. D. baarsii is categorized as free-living, indicating that it does not rely on a host organism for survival and can exist independently in its natural habitat. Notably, D. baarsii has been observed to have no pathogenicity, making it a non-threatening organism in terms of human health. Its single replicon contributes to its genetic stability, which may play a role in its adaptability to anaerobic conditions. The ecological role of Desulfarculus baarsii likely involves contributions to nutrient cycling in anaerobic environments, possibly through processes such as sulfur reduction. Understanding the traits of this bacterium can provide insights into the dynamics of microbial communities in mud habitats and their implications for biogeochemical cycles. The accession number for further genomic data is NC_014365.1, allowing for deeper exploration of its genetic characteristics and potential applications in biotechnology or ecology.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfarculia
OrderDesulfarculales
FamilyDesulfarculaceae
GenusDesulfarculus
SpeciesDesulfarculus baarsii
StrainDSM 2075

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMud
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Desulfarculus baarsii DSM 2075, complete sequence.

Gene Summary

Adenine Count

624017 bp

Thymine Count

629771 bp

Guanine Count

1198802 bp

Cytosine Count

1203141 bp

Genome Length

3655731 bp

Protein-coding Genes

3223 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylenetetrahydrofolate reductase c-terminal domain-containing proteinDEBA_RS11100Not AvailableNegative2462674 - 246334224246.7
fad-dependent oxidoreductaseDEBA_RS11105Not AvailableNegative2463394 - 2467827159120.0
formate--tetrahydrofolate ligaseDEBA_RS11110Not AvailableNegative2468220 - 246999263974.5
fad-dependent oxidoreductaseDEBA_RS11115Not AvailableNegative2470347 - 247238971080.2
gtp cyclohydrolase fole2DEBA_RS11120Not AvailablePositive2472891 - 247367930128.1
peptide chain release factor-like proteinDEBA_RS11125Not AvailablePositive2473698 - 247403912640.1
methyl-accepting chemotaxis proteinDEBA_RS17145Not AvailableNegative2474036 - 247539447488.8
4fe-4s binding proteinDEBA_RS11135Not AvailablePositive2475650 - 247664836619.2
stas domain-containing proteinDEBA_RS11140Not AvailablePositive2476777 - 247709111187.7
class ii fructose-bisphosphate aldolaseDEBA_RS11145Not AvailableNegative2477172 - 247845845344.1

Displaying genes 2381 – 2390 of 3391 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014045Propionic acidC3H6O2Chemical structure of Propionic acid79-09-4
Average74.0785Da
Monoisotopic74.036779436Da
BASm0014057Isovaleric acidC5H10O2Chemical structure of Isovaleric acid503-74-2
Average102.1317Da
Monoisotopic102.068079564Da
BASm0014059Stearic acidC18H36O2Chemical structure of Stearic acid57-11-4
Average284.4772Da
Monoisotopic284.271530396Da
BASm0014062Valeric acidC5H10O2Chemical structure of Valeric acid109-52-4
Average102.1317Da
Monoisotopic102.068079564Da
BASm0039653Enterococcus gallinarumNot available20074-52-6Not available
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–8 of 8 metabolites

Health Effects

No health effects information available for this bacterium.