Desulfarculus baarsii DSM 2075

Gram-negativeMotileAnaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfarculia

Order

Desulfarculales

Family

Desulfarculaceae

Genus

Desulfarculus

Description

Desulfarculus baarsii DSM 2075 is a Gram-negative, anaerobic bacterium found in mud habitats. This organism is characterized by its mesophilic temperature range, indicating it thrives in moderate temperature conditions. D. baarsii possesses a unique structural feature of having two membranes, which is typical of Gram-negative bacteria. The bacterium exhibits mobility, facilitated by the presence of flagella. This motility aids in its ability to navigate its anaerobic environment, potentially influencing its interactions with surrounding microorganisms and substrates. D. baarsii is categorized as free-living, indicating that it does not rely on a host organism for survival and can exist independently in its natural habitat. Notably, D. baarsii has been observed to have no pathogenicity, making it a non-threatening organism in terms of human health. Its single replicon contributes to its genetic stability, which may play a role in its adaptability to anaerobic conditions. The ecological role of Desulfarculus baarsii likely involves contributions to nutrient cycling in anaerobic environments, possibly through processes such as sulfur reduction. Understanding the traits of this bacterium can provide insights into the dynamics of microbial communities in mud habitats and their implications for biogeochemical cycles. The accession number for further genomic data is NC_014365.1, allowing for deeper exploration of its genetic characteristics and potential applications in biotechnology or ecology.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfarculia
OrderDesulfarculales
FamilyDesulfarculaceae
GenusDesulfarculus
SpeciesDesulfarculus baarsii
StrainDSM 2075

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMud
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Desulfarculus baarsii DSM 2075, complete sequence.

Gene Summary

Adenine Count

624017 bp

Thymine Count

629771 bp

Guanine Count

1198802 bp

Cytosine Count

1203141 bp

Genome Length

3655731 bp

Protein-coding Genes

3223 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nuclear transport factor 2 family proteinDEBA_RS10565Not AvailablePositive2344512 - 234502418857.7
hypothetical proteinDEBA_RS18155Not AvailableNegative2345250 - 234569916194.1
formate dehydrogenase subunit alphaDEBA_RS18725Not AvailableNegative2345740 - 234843697837.3
mbl fold metallo-hydrolaseDEBA_RS10580Not AvailablePositive2348759 - 235039659319.4
acetate--coa ligaseDEBA_RS10585Not AvailableNegative2350468 - 235245673503.7
ofa family mfs transporterDEBA_RS10590Not AvailableNegative2352544 - 235382144005.9
sigma-54 dependent transcriptional regulatorDEBA_RS10595Not AvailableNegative2354055 - 235542549636.2
cache domain-containing proteinDEBA_RS17105Not AvailableNegative2355439 - 235764082868.5
yajd family hnh nucleaseDEBA_RS18920Not AvailablePositive2357763 - 235813413890.4
alpha/beta fold hydrolaseDEBA_RS10610Not AvailableNegative2358154 - 235908033744.5

Displaying genes 2271 – 2280 of 3391 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014045Propionic acidC3H6O2Chemical structure of Propionic acid79-09-4
Average74.0785Da
Monoisotopic74.036779436Da
BASm0014057Isovaleric acidC5H10O2Chemical structure of Isovaleric acid503-74-2
Average102.1317Da
Monoisotopic102.068079564Da
BASm0014059Stearic acidC18H36O2Chemical structure of Stearic acid57-11-4
Average284.4772Da
Monoisotopic284.271530396Da
BASm0014062Valeric acidC5H10O2Chemical structure of Valeric acid109-52-4
Average102.1317Da
Monoisotopic102.068079564Da
BASm0039653Enterococcus gallinarumNot available20074-52-6Not available
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available

Displaying 1–8 of 8 metabolites

Health Effects

No health effects information available for this bacterium.