Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | HSERO_RS04780 | Not Available | Positive | 1045754 - 1046797 | 37375.8 |
| abc transporter substrate-binding protein | HSERO_RS04785 | Not Available | Positive | 1046886 - 1048202 | 48424.1 |
| sfnb family sulfur acquisition oxidoreductase | HSERO_RS04790 | Not Available | Positive | 1048249 - 1049508 | 45690.8 |
| abc transporter atp-binding protein | HSERO_RS04795 | Not Available | Positive | 1049510 - 1050271 | 27491.2 |
| lysr family transcriptional regulator | HSERO_RS04800 | Not Available | Negative | 1050278 - 1051192 | 33352.7 |
| nad(p)-dependent oxidoreductase | HSERO_RS04805 | Not Available | Positive | 1051427 - 1052314 | 31101.8 |
| aldehyde dehydrogenase family protein | HSERO_RS04810 | Not Available | Positive | 1052330 - 1053844 | 53548.7 |
| duf3100 domain-containing protein | HSERO_RS04815 | Not Available | Positive | 1053939 - 1055273 | 46776.3 |
| dass family sodium-coupled anion symporter | HSERO_RS04820 | Not Available | Positive | 1055424 - 1056929 | 53450.5 |
| higa family addiction module antitoxin | HSERO_RS04825 | Not Available | Positive | 1057049 - 1057357 | 11627.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


