Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | HSERO_RS04625 | Not Available | Positive | 1006546 - 1008216 | 60367.0 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS04630 | Not Available | Positive | 1008265 - 1009029 | 26264.3 |
| acetyl-coa c-acyltransferase | HSERO_RS04635 | Not Available | Positive | 1009108 - 1010310 | 41185.9 |
| acyl-coa dehydrogenase | HSERO_RS04640 | Not Available | Positive | 1010347 - 1011495 | 41357.6 |
| helix-turn-helix domain-containing protein | HSERO_RS04645 | Not Available | Negative | 1011591 - 1012514 | 34220.7 |
| phenylacetaldoxime dehydratase family protein | HSERO_RS04650 | Not Available | Negative | 1012983 - 1014032 | 40064.3 |
| gtp-binding protein | HSERO_RS04655 | Not Available | Negative | 1014058 - 1015299 | 45803.5 |
| nitrile hydratase subunit beta | HSERO_RS04660 | Not Available | Negative | 1015296 - 1015955 | 24776.2 |
| nitrile hydratase subunit alpha | HSERO_RS04665 | Not Available | Negative | 1016017 - 1016616 | 21894.3 |
| amidase | HSERO_RS04670 | Not Available | Negative | 1016687 - 1018201 | 53240.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


