Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type b 50s ribosomal protein l31 | HSERO_RS04310 | Not Available | Negative | 948487 - 948756 | 10141.0 |
| transcription termination factor rho | HSERO_RS04315 | Not Available | Negative | 949021 - 950283 | 47262.5 |
| thioredoxin trxa | HSERO_RS04320 | Not Available | Negative | 950415 - 950741 | 11597.1 |
| pd-(d/e)xk nuclease family protein | HSERO_RS04325 | Not Available | Positive | 951188 - 953962 | 102564.0 |
| uvrd-helicase domain-containing protein | HSERO_RS04330 | Not Available | Positive | 953959 - 957435 | 127124.0 |
| cation:proton antiporter | HSERO_RS04335 | Not Available | Positive | 957794 - 959002 | 43415.8 |
| ybdk family carboxylate-amine ligase | HSERO_RS04340 | Not Available | Positive | 958999 - 960228 | 46685.4 |
| nad(p)/fad-dependent oxidoreductase | HSERO_RS04345 | Not Available | Positive | 960425 - 961633 | 43370.3 |
| 30s ribosomal protein s21 | HSERO_RS04350 | Not Available | Positive | 961825 - 962037 | 8536.6 |
| gatb/yqey domain-containing protein | HSERO_RS04355 | Not Available | Positive | 962336 - 962782 | 15687.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


