Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | HSERO_RS04260 | Not Available | Positive | 936381 - 936884 | 18043.6 |
| site-specific tyrosine recombinase xerd | HSERO_RS04265 | Not Available | Positive | 936894 - 937817 | 34599.8 |
| aminoacyl-trna deacylase | HSERO_RS04270 | Not Available | Positive | 937896 - 938396 | 17925.8 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | HSERO_RS04275 | Not Available | Positive | 938428 - 939045 | 21816.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | HSERO_RS04280 | Not Available | Negative | 939141 - 940205 | 37929.1 |
| dna-binding protein ybib | HSERO_RS04285 | Not Available | Positive | 940346 - 941356 | 35995.5 |
| hypothetical protein | HSERO_RS04290 | Not Available | Negative | 941596 - 942048 | 17420.2 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | HSERO_RS04295 | Not Available | Positive | 943015 - 945135 | 76187.5 |
| mate family efflux transporter | HSERO_RS04300 | Not Available | Negative | 945119 - 946504 | 49070.1 |
| arnt family glycosyltransferase | HSERO_RS04305 | Not Available | Negative | 946528 - 948252 | 63463.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


