Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | HSERO_RS04210 | Not Available | Negative | 925067 - 926428 | 49809.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | HSERO_RS04215 | Not Available | Negative | 926392 - 926877 | 17578.2 |
| trna epoxyqueuosine(34) reductase queg | HSERO_RS04220 | Not Available | Positive | 926945 - 928090 | 41436.5 |
| aec family transporter | HSERO_RS04225 | Not Available | Negative | 928103 - 928993 | 31528.7 |
| response regulator transcription factor | HSERO_RS04230 | Not Available | Negative | 929009 - 929599 | 21377.0 |
| two-component system sensor histidine kinase ntrb | HSERO_RS04235 | Not Available | Negative | 929653 - 931677 | 75443.0 |
| trap transporter substrate-binding protein | HSERO_RS04240 | Not Available | Positive | 932160 - 933164 | 36835.6 |
| trap transporter small permease | HSERO_RS04245 | Not Available | Positive | 933287 - 933847 | 21086.8 |
| trap transporter large permease | HSERO_RS04250 | Not Available | Positive | 933844 - 935124 | 45561.0 |
| voc family protein | HSERO_RS04255 | Not Available | Negative | 935625 - 936275 | 22883.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


