Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative bacteriophage gp29 protein | HSERO_RS04605 | Not Available | Negative | 1002118 - 1002531 | 13676.3 |
| Hypothetical protein | HSERO_RS04610 | Not Available | Positive | 1002956 - 1004071 | 42036.6 |
| Attr | Not Available | Not Available | Positive | 1005193 - 1005215 | Not Available |
| chromosomal replication initiator protein dnaa | HSERO_RS00005 | Not Available | Positive | 1 - 1398 | 52121.4 |
| dna polymerase iii subunit beta | HSERO_RS00010 | Not Available | Positive | 2012 - 3118 | 41070.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | HSERO_RS00015 | Not Available | Positive | 3255 - 5753 | 92265.2 |
| helix-turn-helix domain-containing protein | HSERO_RS24205 | Not Available | Negative | 5853 - 6176 | 11770.4 |
| sce7726 family protein | HSERO_RS24620 | Not Available | Positive | 6261 - 7127 | 32652.3 |
| sce7725 family protein | HSERO_RS24050 | Not Available | Positive | 7184 - 8122 | 35901.8 |
| rna-directed dna polymerase | HSERO_RS00025 | Not Available | Positive | 8177 - 11245 | 117167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


