Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis protein pilp | HSERO_RS04050 | Not Available | Positive | 886951 - 887460 | 17652.3 |
| gspe/pule family protein | HSERO_RS04055 | Not Available | Positive | 887457 - 889082 | 58748.9 |
| type ii secretion system f family protein | HSERO_RS04060 | Not Available | Positive | 889072 - 890145 | 40052.0 |
| type 4 pilus major pilin | HSERO_RS04065 | Not Available | Positive | 890220 - 890771 | 18641.2 |
| type iv pilus biogenesis protein pilm | HSERO_RS04070 | Not Available | Positive | 890862 - 891359 | 17716.9 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | HSERO_RS04075 | Not Available | Positive | 891413 - 892759 | 45817.9 |
| lytic transglycosylase domain-containing protein | HSERO_RS04080 | Not Available | Positive | 892740 - 893237 | 18849.8 |
| type iv pilus twitching motility protein pilt | HSERO_RS04085 | Not Available | Positive | 893466 - 894563 | 40904.4 |
| cest family type iii secretion system chaperone | HSERO_RS04090 | Not Available | Positive | 894726 - 895127 | 15259.1 |
| hypothetical protein | HSERO_RS04095 | Not Available | Positive | 895179 - 896624 | 53115.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


