Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esci/ysci/hrpb family type iii secretion system inner rod protein | HSERO_RS04000 | Not Available | Positive | 877060 - 877464 | 14646.5 |
| type iii secretion system inner membrane ring lipoprotein sctj | HSERO_RS04005 | Not Available | Positive | 877480 - 878358 | 31500.8 |
| hypothetical protein | HSERO_RS04010 | Not Available | Positive | 878355 - 879002 | 24247.0 |
| hrpe/yscl family type iii secretion apparatus protein | HSERO_RS04015 | Not Available | Positive | 879046 - 879747 | 25139.1 |
| hypothetical protein | HSERO_RS04020 | Not Available | Positive | 879871 - 880104 | 8785.39 |
| hypothetical protein | HSERO_RS04025 | Not Available | Positive | 880109 - 880522 | 14690.6 |
| type iii secretion system outer membrane ring subunit sctc | HSERO_RS04030 | Not Available | Positive | 880519 - 882600 | 72745.0 |
| toxin co-regulated pilus biosynthesis q family protein | HSERO_RS04035 | Not Available | Positive | 883186 - 883878 | 23548.1 |
| piln family type ivb pilus formation outer membrane protein | HSERO_RS04040 | Not Available | Positive | 883878 - 885686 | 61794.5 |
| type 4b pilus protein pilo2 | HSERO_RS04045 | Not Available | Positive | 885696 - 886961 | 47595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


