Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fha domain-containing protein | HSERO_RS03950 | Not Available | Positive | 868739 - 869773 | 37389.1 |
| flii/yscn family atpase | HSERO_RS03955 | Not Available | Positive | 869767 - 871149 | 49938.4 |
| hypothetical protein | HSERO_RS03960 | Not Available | Positive | 871164 - 871658 | 19045.9 |
| hypothetical protein | HSERO_RS03965 | Not Available | Positive | 871660 - 872316 | 22757.2 |
| type iii secretion system cytoplasmic ring protein sctq | HSERO_RS03970 | Not Available | Positive | 872407 - 873540 | 39796.6 |
| type iii secretion system export apparatus subunit sctr | HSERO_RS03975 | Not Available | Positive | 873534 - 874196 | 23996.4 |
| type iii secretion system export apparatus subunit scts | HSERO_RS03980 | Not Available | Positive | 874262 - 874525 | 9468.02 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | HSERO_RS03985 | Not Available | Positive | 874529 - 875317 | 28181.7 |
| type iii secretion system export apparatus subunit sctu | HSERO_RS03990 | Not Available | Positive | 875333 - 876448 | 40642.8 |
| hypothetical protein | HSERO_RS03995 | Not Available | Positive | 876451 - 876981 | 17979.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


