Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6708 domain-containing protein | HSERO_RS03765 | Not Available | Positive | 829254 - 830219 | 37047.9 |
| type vi secretion system protein tssa | HSERO_RS03770 | Not Available | Positive | 830344 - 831471 | 40843.2 |
| ompa family protein | HSERO_RS03775 | Not Available | Negative | 831617 - 832432 | 28453.8 |
| type vi secretion system-associated protein tagf | HSERO_RS03780 | Not Available | Negative | 832436 - 833422 | 36015.4 |
| type vi secretion system membrane subunit tssm | HSERO_RS03785 | Not Available | Negative | 833419 - 837294 | 142733.0 |
| hypothetical protein | HSERO_RS03790 | Not Available | Negative | 837325 - 838845 | 53366.9 |
| paar domain-containing protein | HSERO_RS03795 | Not Available | Negative | 838891 - 839148 | 8392.09 |
| m15 family metallopeptidase | HSERO_RS03800 | Not Available | Negative | 839239 - 840078 | 31241.6 |
| hypothetical protein | HSERO_RS03805 | Not Available | Positive | 840568 - 840828 | 9474.82 |
| hypothetical protein | HSERO_RS03810 | Not Available | Positive | 840899 - 841798 | 30557.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


